Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 AC021242.3-201ENST00000607598 1377 ntBASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSBP3Q9BWW4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.42■□□□□ 0.7
SSBP3Q9BWW4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSBP3Q9BWW4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSBP3Q9BWW4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSBP3Q9BWW4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSBP3Q9BWW4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.39■□□□□ 0.69
SSBP3Q9BWW4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 AL356441.2-201ENST00000443009 864 ntBASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSBP3Q9BWW4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 TSPY9P-201ENST00000440215 945 ntBASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 TSPY11P-201ENST00000442607 1045 ntBASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSBP3Q9BWW4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 SLC6A10P-202ENST00000431994 2058 ntBASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 AC092028.1-203ENST00000608262 953 ntBASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 AC131212.1-201ENST00000613771 668 ntBASIC19.36■□□□□ 0.69
SSBP3Q9BWW4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 KRT16P3-201ENST00000439127 1283 ntBASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.35■□□□□ 0.69
SSBP3Q9BWW4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 UNC93B8-201ENST00000511903 705 ntBASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 AF131216.4-201ENST00000638924 1588 ntBASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.34■□□□□ 0.69
SSBP3Q9BWW4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSBP3Q9BWW4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSBP3Q9BWW4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSBP3Q9BWW4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SSBP3Q9BWW4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SSBP3Q9BWW4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSBP3Q9BWW4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms