Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 AL117328.2-201ENST00000624617 1940 ntBASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 AC126177.7-201ENST00000547904 679 ntBASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RTBDNQ9BSG5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTBDNQ9BSG5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RTBDNQ9BSG5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.34■□□□□ 0.69
RTBDNQ9BSG5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTBDNQ9BSG5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTBDNQ9BSG5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RTBDNQ9BSG5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTBDNQ9BSG5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTBDNQ9BSG5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTBDNQ9BSG5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTBDNQ9BSG5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTBDNQ9BSG5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.32■□□□□ 0.68
RTBDNQ9BSG5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTBDNQ9BSG5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTBDNQ9BSG5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
RTBDNQ9BSG5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 AC233723.2-201ENST00000623798 2106 ntBASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTBDNQ9BSG5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTBDNQ9BSG5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTBDNQ9BSG5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms