Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 SLC25A24-204ENST00000569674 2357 ntBASIC23.46■■□□□ 1.35
BCAS4Q8TDM0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
BCAS4Q8TDM0 AL391121.1-201ENST00000607967 1349 ntBASIC23.46■■□□□ 1.35
BCAS4Q8TDM0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.45■■□□□ 1.35
BCAS4Q8TDM0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
BCAS4Q8TDM0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
BCAS4Q8TDM0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
BCAS4Q8TDM0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
BCAS4Q8TDM0 AC127496.7-201ENST00000625110 1798 ntBASIC23.45■■□□□ 1.34
BCAS4Q8TDM0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
BCAS4Q8TDM0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.45■■□□□ 1.34
BCAS4Q8TDM0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.45■■□□□ 1.34
BCAS4Q8TDM0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
BCAS4Q8TDM0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.44■■□□□ 1.34
BCAS4Q8TDM0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.43■■□□□ 1.34
BCAS4Q8TDM0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
BCAS4Q8TDM0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
BCAS4Q8TDM0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
BCAS4Q8TDM0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
BCAS4Q8TDM0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BCAS4Q8TDM0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BCAS4Q8TDM0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
BCAS4Q8TDM0 GUSBP5-202ENST00000510805 1989 ntBASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 SETD8P1-201ENST00000623146 1180 ntBASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
BCAS4Q8TDM0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BCAS4Q8TDM0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
BCAS4Q8TDM0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BCAS4Q8TDM0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BCAS4Q8TDM0 AL137060.1-201ENST00000618151 2648 ntBASIC23.35■■□□□ 1.33
BCAS4Q8TDM0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.35■■□□□ 1.33
BCAS4Q8TDM0 AC108673.1-201ENST00000510422 1159 ntBASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms