Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 AC097381.1-201ENST00000429019 1296 ntBASIC28.14■■■□□ 2.1
TRPM4Q8TD43 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRPM4Q8TD43 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
TRPM4Q8TD43 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TRPM4Q8TD43 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.13■■■□□ 2.09
TRPM4Q8TD43 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRPM4Q8TD43 AL162430.1-201ENST00000480705 870 ntBASIC28.13■■■□□ 2.09
TRPM4Q8TD43 AC090877.2-201ENST00000558441 1738 ntBASIC28.12■■■□□ 2.09
TRPM4Q8TD43 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.12■■■□□ 2.09
TRPM4Q8TD43 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM4Q8TD43 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM4Q8TD43 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM4Q8TD43 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.1■■■□□ 2.09
TRPM4Q8TD43 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.1■■■□□ 2.09
TRPM4Q8TD43 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.09■■■□□ 2.09
TRPM4Q8TD43 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM4Q8TD43 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.08■■■□□ 2.09
TRPM4Q8TD43 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM4Q8TD43 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.08■■■□□ 2.09
TRPM4Q8TD43 AC091305.1-201ENST00000479476 895 ntBASIC28.08■■■□□ 2.09
TRPM4Q8TD43 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.08■■■□□ 2.09
TRPM4Q8TD43 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRPM4Q8TD43 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.07■■■□□ 2.08
TRPM4Q8TD43 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM4Q8TD43 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.07■■■□□ 2.08
TRPM4Q8TD43 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRPM4Q8TD43 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM4Q8TD43 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRPM4Q8TD43 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 MIR4767-201ENST00000582827 78 ntBASIC28.05■■■□□ 2.08
TRPM4Q8TD43 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.05■■■□□ 2.08
TRPM4Q8TD43 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRPM4Q8TD43 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRPM4Q8TD43 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRPM4Q8TD43 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRPM4Q8TD43 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.04■■■□□ 2.08
TRPM4Q8TD43 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRPM4Q8TD43 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.03■■■□□ 2.08
TRPM4Q8TD43 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.03■■■□□ 2.08
TRPM4Q8TD43 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
TRPM4Q8TD43 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.02■■■□□ 2.08
TRPM4Q8TD43 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
TRPM4Q8TD43 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.08
TRPM4Q8TD43 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TRPM4Q8TD43 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.01■■■□□ 2.07
TRPM4Q8TD43 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.01■■■□□ 2.07
TRPM4Q8TD43 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.01■■■□□ 2.07
TRPM4Q8TD43 CA15P2-201ENST00000611168 834 ntBASIC28.01■■■□□ 2.07
TRPM4Q8TD43 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TRPM4Q8TD43 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.01■■■□□ 2.07
TRPM4Q8TD43 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28■■■□□ 2.07
TRPM4Q8TD43 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRPM4Q8TD43 DUX4L19-201ENST00000557448 1267 ntBASIC28■■■□□ 2.07
TRPM4Q8TD43 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28■■■□□ 2.07
TRPM4Q8TD43 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRPM4Q8TD43 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRPM4Q8TD43 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 SYT6-210ENST00000641643 1587 ntBASIC27.99■■■□□ 2.07
TRPM4Q8TD43 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TRPM4Q8TD43 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.98■■■□□ 2.07
TRPM4Q8TD43 AC004448.1-201ENST00000458332 883 ntBASIC27.98■■■□□ 2.07
TRPM4Q8TD43 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TRPM4Q8TD43 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
TRPM4Q8TD43 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TRPM4Q8TD43 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
TRPM4Q8TD43 SERBP1P1-201ENST00000396021 1160 ntBASIC27.96■■■□□ 2.07
TRPM4Q8TD43 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TRPM4Q8TD43 RASA4CP-201ENST00000424092 1398 ntBASIC27.96■■■□□ 2.07
TRPM4Q8TD43 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms