Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZIC4Q8N9L1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.77■□□□□ 0.91
ZIC4Q8N9L1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZIC4Q8N9L1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZIC4Q8N9L1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZIC4Q8N9L1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.75■□□□□ 0.91
ZIC4Q8N9L1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZIC4Q8N9L1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.75■□□□□ 0.91
ZIC4Q8N9L1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
ZIC4Q8N9L1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC4Q8N9L1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC4Q8N9L1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC4Q8N9L1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC4Q8N9L1 THA1P-201ENST00000590384 1145 ntBASIC20.74■□□□□ 0.91
ZIC4Q8N9L1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
ZIC4Q8N9L1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC4Q8N9L1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 AL031848.2-201ENST00000607670 837 ntBASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ZIC4Q8N9L1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZIC4Q8N9L1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZIC4Q8N9L1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZIC4Q8N9L1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZIC4Q8N9L1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ZIC4Q8N9L1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.7■□□□□ 0.91
ZIC4Q8N9L1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZIC4Q8N9L1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZIC4Q8N9L1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZIC4Q8N9L1 MIR4281-201ENST00000580852 62 ntBASIC20.7■□□□□ 0.9
ZIC4Q8N9L1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZIC4Q8N9L1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 HLA-L-211ENST00000482052 1765 ntBASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZIC4Q8N9L1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZIC4Q8N9L1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ZIC4Q8N9L1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 AL139125.2-201ENST00000623134 1869 ntBASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.67■□□□□ 0.9
ZIC4Q8N9L1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZIC4Q8N9L1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZIC4Q8N9L1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZIC4Q8N9L1 AF131216.4-201ENST00000638924 1588 ntBASIC20.64■□□□□ 0.9
ZIC4Q8N9L1 AL451085.2-201ENST00000605085 799 ntBASIC20.64■□□□□ 0.89
ZIC4Q8N9L1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZIC4Q8N9L1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.64■□□□□ 0.89
ZIC4Q8N9L1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZIC4Q8N9L1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
ZIC4Q8N9L1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms