Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 ECEL1P2-201ENST00000461596 1295 ntBASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.12■□□□□ 0.81
NKAIN3Q8N8D7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKAIN3Q8N8D7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 FOXO3B-201ENST00000395675 1928 ntBASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKAIN3Q8N8D7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 AC093536.1-201ENST00000569153 554 ntBASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKAIN3Q8N8D7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NKAIN3Q8N8D7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.08■□□□□ 0.81
NKAIN3Q8N8D7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
NKAIN3Q8N8D7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.08■□□□□ 0.8
NKAIN3Q8N8D7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
NKAIN3Q8N8D7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NKAIN3Q8N8D7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKAIN3Q8N8D7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKAIN3Q8N8D7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NKAIN3Q8N8D7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKAIN3Q8N8D7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKAIN3Q8N8D7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKAIN3Q8N8D7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKAIN3Q8N8D7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.02■□□□□ 0.8
NKAIN3Q8N8D7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKAIN3Q8N8D7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.02■□□□□ 0.8
NKAIN3Q8N8D7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKAIN3Q8N8D7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKAIN3Q8N8D7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms