Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 AC096887.2-201ENST00000623443 1957 ntBASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 MIR935-201ENST00000401179 91 ntBASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC155Q8N6L0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC155Q8N6L0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CCDC155Q8N6L0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.35■■□□□ 1.81
CCDC155Q8N6L0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
CCDC155Q8N6L0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CCDC155Q8N6L0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC155Q8N6L0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC155Q8N6L0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CCDC155Q8N6L0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC155Q8N6L0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC155Q8N6L0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
CCDC155Q8N6L0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC155Q8N6L0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC155Q8N6L0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC155Q8N6L0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC155Q8N6L0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 AC011551.1-201ENST00000614101 683 ntBASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC155Q8N6L0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC155Q8N6L0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC155Q8N6L0 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.31■■□□□ 1.8
CCDC155Q8N6L0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC155Q8N6L0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC155Q8N6L0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.3■■□□□ 1.8
CCDC155Q8N6L0 MIR638-201ENST00000385237 100 ntBASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 AC131281.2-201ENST00000520478 145 ntBASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 AL139246.5-201ENST00000606645 996 ntBASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 AC010997.5-201ENST00000609182 354 ntBASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC155Q8N6L0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC155Q8N6L0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC155Q8N6L0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.28■■□□□ 1.8
CCDC155Q8N6L0 MTDHP2-201ENST00000601468 714 ntBASIC26.28■■□□□ 1.8
CCDC155Q8N6L0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC155Q8N6L0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC155Q8N6L0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 MIR6724-1-201ENST00000616420 92 ntBASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 MIR6724-2-201ENST00000616483 92 ntBASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 MIR6724-4-201ENST00000617390 92 ntBASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 MIR6724-3-201ENST00000622482 92 ntBASIC26.26■■□□□ 1.79
CCDC155Q8N6L0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 AL117332.1-201ENST00000622628 974 ntBASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC155Q8N6L0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CCDC155Q8N6L0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms