Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAM1L1Q8N609 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
TRAM1L1Q8N609 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.19■■□□□ 1.3
TRAM1L1Q8N609 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAM1L1Q8N609 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
TRAM1L1Q8N609 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRAM1L1Q8N609 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAM1L1Q8N609 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.18■■□□□ 1.3
TRAM1L1Q8N609 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 AC137630.3-201ENST00000607245 391 ntBASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 AL035685.1-201ENST00000636663 812 ntBASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAM1L1Q8N609 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 AP003733.4-201ENST00000623785 1697 ntBASIC23.16■■□□□ 1.3
TRAM1L1Q8N609 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.15■■□□□ 1.3
TRAM1L1Q8N609 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRAM1L1Q8N609 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.14■■□□□ 1.3
TRAM1L1Q8N609 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 Z92544.1-202ENST00000571933 1220 ntBASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAM1L1Q8N609 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 BX664725.1-201ENST00000438252 379 ntBASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 AC138932.3-201ENST00000567634 1902 ntBASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAM1L1Q8N609 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TRAM1L1Q8N609 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAM1L1Q8N609 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAM1L1Q8N609 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.12■■□□□ 1.29
TRAM1L1Q8N609 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAM1L1Q8N609 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 AF131216.4-201ENST00000638924 1588 ntBASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRAM1L1Q8N609 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRAM1L1Q8N609 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRAM1L1Q8N609 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRAM1L1Q8N609 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRAM1L1Q8N609 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRAM1L1Q8N609 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAM1L1Q8N609 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TRAM1L1Q8N609 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.09■■□□□ 1.29
TRAM1L1Q8N609 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.08■■□□□ 1.29
TRAM1L1Q8N609 AC021242.3-201ENST00000607598 1377 ntBASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 AC239859.2-201ENST00000444165 318 ntBASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAM1L1Q8N609 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 KRT125P-201ENST00000546827 989 ntBASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAM1L1Q8N609 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms