Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 AC021242.3-201ENST00000607598 1377 ntBASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 AC020928.2-201ENST00000588717 2197 ntBASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ARHGEF39Q8N4T4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF39Q8N4T4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
ARHGEF39Q8N4T4 AC239859.2-201ENST00000444165 318 ntBASIC22.15■■□□□ 1.14
ARHGEF39Q8N4T4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.15■■□□□ 1.14
ARHGEF39Q8N4T4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ARHGEF39Q8N4T4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ARHGEF39Q8N4T4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ARHGEF39Q8N4T4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
ARHGEF39Q8N4T4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ARHGEF39Q8N4T4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ARHGEF39Q8N4T4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ARHGEF39Q8N4T4 GUSBP5-201ENST00000418136 578 ntBASIC22.14■■□□□ 1.13
ARHGEF39Q8N4T4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
ARHGEF39Q8N4T4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.14■■□□□ 1.13
ARHGEF39Q8N4T4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ARHGEF39Q8N4T4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 BX664725.1-201ENST00000438252 379 ntBASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF39Q8N4T4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF39Q8N4T4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF39Q8N4T4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.12■■□□□ 1.13
ARHGEF39Q8N4T4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.12■■□□□ 1.13
ARHGEF39Q8N4T4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF39Q8N4T4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF39Q8N4T4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.11■■□□□ 1.13
ARHGEF39Q8N4T4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.11■■□□□ 1.13
ARHGEF39Q8N4T4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ARHGEF39Q8N4T4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.11■■□□□ 1.13
ARHGEF39Q8N4T4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARHGEF39Q8N4T4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARHGEF39Q8N4T4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.1■■□□□ 1.13
ARHGEF39Q8N4T4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 MIR4787-201ENST00000607364 84 ntBASIC22.09■■□□□ 1.13
ARHGEF39Q8N4T4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 AC142381.3-201ENST00000568208 1670 ntBASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.08■■□□□ 1.13
ARHGEF39Q8N4T4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
ARHGEF39Q8N4T4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ARHGEF39Q8N4T4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ARHGEF39Q8N4T4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
ARHGEF39Q8N4T4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 KRT125P-201ENST00000546827 989 ntBASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARHGEF39Q8N4T4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 AC138932.3-201ENST00000567634 1902 ntBASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ARHGEF39Q8N4T4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms