Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF440Q8IYI8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF440Q8IYI8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF440Q8IYI8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF440Q8IYI8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF440Q8IYI8 AC022616.5-201ENST00000518796 181 ntBASIC21.33■■□□□ 1.01
ZNF440Q8IYI8 DUX4L18-201ENST00000553347 1267 ntBASIC21.33■■□□□ 1.01
ZNF440Q8IYI8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF440Q8IYI8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF440Q8IYI8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF440Q8IYI8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.33■■□□□ 1
ZNF440Q8IYI8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ZNF440Q8IYI8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF440Q8IYI8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.32■■□□□ 1
ZNF440Q8IYI8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF440Q8IYI8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZNF440Q8IYI8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.32■■□□□ 1
ZNF440Q8IYI8 AC074183.2-201ENST00000623112 922 ntBASIC21.32■■□□□ 1
ZNF440Q8IYI8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF440Q8IYI8 HLA-L-211ENST00000482052 1765 ntBASIC21.31■■□□□ 1
ZNF440Q8IYI8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.31■■□□□ 1
ZNF440Q8IYI8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF440Q8IYI8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ZNF440Q8IYI8 ATP5G2P3-201ENST00000429083 425 ntBASIC21.31■■□□□ 1
ZNF440Q8IYI8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF440Q8IYI8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF440Q8IYI8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF440Q8IYI8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF440Q8IYI8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.31■■□□□ 1
ZNF440Q8IYI8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.3■■□□□ 1
ZNF440Q8IYI8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF440Q8IYI8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF440Q8IYI8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ZNF440Q8IYI8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF440Q8IYI8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF440Q8IYI8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF440Q8IYI8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.29■■□□□ 1
ZNF440Q8IYI8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF440Q8IYI8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF440Q8IYI8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
ZNF440Q8IYI8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF440Q8IYI8 AC004987.1-201ENST00000428627 508 ntBASIC21.29■■□□□ 1
ZNF440Q8IYI8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZNF440Q8IYI8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF440Q8IYI8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ZNF440Q8IYI8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF440Q8IYI8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF440Q8IYI8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.28■■□□□ 1
ZNF440Q8IYI8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ZNF440Q8IYI8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 TSPY13P-201ENST00000338964 914 ntBASIC21.28■■□□□ 1
ZNF440Q8IYI8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.28■■□□□ 1
ZNF440Q8IYI8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 BHLHE23-202ENST00000612929 1109 ntBASIC21.28■■□□□ 1
ZNF440Q8IYI8 AC011551.1-201ENST00000614101 683 ntBASIC21.28■■□□□ 1
ZNF440Q8IYI8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF440Q8IYI8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ZNF440Q8IYI8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF440Q8IYI8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF440Q8IYI8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ZNF440Q8IYI8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.27■■□□□ 1
ZNF440Q8IYI8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ZNF440Q8IYI8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
ZNF440Q8IYI8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZNF440Q8IYI8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF440Q8IYI8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF440Q8IYI8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF440Q8IYI8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.26■□□□□ 0.99
ZNF440Q8IYI8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF440Q8IYI8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF440Q8IYI8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF440Q8IYI8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF440Q8IYI8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF440Q8IYI8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF440Q8IYI8 AC012354.3-201ENST00000623734 483 ntBASIC21.25■□□□□ 0.99
ZNF440Q8IYI8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF440Q8IYI8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF440Q8IYI8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF440Q8IYI8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms