Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC28Q86X40 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC28Q86X40 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC28Q86X40 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC28Q86X40 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC28Q86X40 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC28Q86X40 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC28Q86X40 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC28Q86X40 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.63■□□□□ 0.89
LRRC28Q86X40 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC28Q86X40 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRRC28Q86X40 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRRC28Q86X40 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC28Q86X40 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 AL359504.2-201ENST00000605506 1601 ntBASIC20.61■□□□□ 0.89
LRRC28Q86X40 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.61■□□□□ 0.89
LRRC28Q86X40 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LRRC28Q86X40 U85056.1-201ENST00000616429 682 ntBASIC20.61■□□□□ 0.89
LRRC28Q86X40 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 SLC6A10P-202ENST00000431994 2058 ntBASIC20.61■□□□□ 0.89
LRRC28Q86X40 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC28Q86X40 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC28Q86X40 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC28Q86X40 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC28Q86X40 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC28Q86X40 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC28Q86X40 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC28Q86X40 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC28Q86X40 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC28Q86X40 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC28Q86X40 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC28Q86X40 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC28Q86X40 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC28Q86X40 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRRC28Q86X40 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC28Q86X40 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRRC28Q86X40 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LRRC28Q86X40 RP9P-202ENST00000450133 1212 ntBASIC20.58■□□□□ 0.89
LRRC28Q86X40 MIR3960-201ENST00000583311 91 ntBASIC20.58■□□□□ 0.89
LRRC28Q86X40 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC28Q86X40 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRRC28Q86X40 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC28Q86X40 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LRRC28Q86X40 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC28Q86X40 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC28Q86X40 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LRRC28Q86X40 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC28Q86X40 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC28Q86X40 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC28Q86X40 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC28Q86X40 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.56■□□□□ 0.88
LRRC28Q86X40 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC28Q86X40 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC28Q86X40 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC28Q86X40 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC28Q86X40 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
LRRC28Q86X40 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC28Q86X40 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC28Q86X40 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC28Q86X40 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
LRRC28Q86X40 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC28Q86X40 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC28Q86X40 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC28Q86X40 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC28Q86X40 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC28Q86X40 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC28Q86X40 AC004812.2-201ENST00000611079 2094 ntBASIC20.54■□□□□ 0.88
LRRC28Q86X40 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC28Q86X40 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC28Q86X40 AC133552.2-201ENST00000619106 1032 ntBASIC20.54■□□□□ 0.88
LRRC28Q86X40 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC28Q86X40 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC28Q86X40 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRRC28Q86X40 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LRRC28Q86X40 AC093536.1-201ENST00000569153 554 ntBASIC20.53■□□□□ 0.88
LRRC28Q86X40 AC026202.3-201ENST00000600805 1127 ntBASIC20.53■□□□□ 0.88
LRRC28Q86X40 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms