Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.02■□□□□ 0.96
SHFQ7M4L6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.02■□□□□ 0.96
SHFQ7M4L6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHFQ7M4L6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHFQ7M4L6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SHFQ7M4L6 DUSP8P5-201ENST00000422884 1815 ntBASIC21.01■□□□□ 0.95
SHFQ7M4L6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.01■□□□□ 0.95
SHFQ7M4L6 ECEL1P2-201ENST00000461596 1295 ntBASIC21.01■□□□□ 0.95
SHFQ7M4L6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.01■□□□□ 0.95
SHFQ7M4L6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHFQ7M4L6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHFQ7M4L6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHFQ7M4L6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21■□□□□ 0.95
SHFQ7M4L6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHFQ7M4L6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SHFQ7M4L6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21■□□□□ 0.95
SHFQ7M4L6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHFQ7M4L6 C9orf163-202ENST00000624034 2573 ntBASIC20.99■□□□□ 0.95
SHFQ7M4L6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
SHFQ7M4L6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHFQ7M4L6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.99■□□□□ 0.95
SHFQ7M4L6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHFQ7M4L6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SHFQ7M4L6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.98■□□□□ 0.95
SHFQ7M4L6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.98■□□□□ 0.95
SHFQ7M4L6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 AC022413.1-201ENST00000624602 984 ntBASIC20.98■□□□□ 0.95
SHFQ7M4L6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.98■□□□□ 0.95
SHFQ7M4L6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHFQ7M4L6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.97■□□□□ 0.95
SHFQ7M4L6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.97■□□□□ 0.95
SHFQ7M4L6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHFQ7M4L6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHFQ7M4L6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.96■□□□□ 0.95
SHFQ7M4L6 RP9P-202ENST00000450133 1212 ntBASIC20.96■□□□□ 0.95
SHFQ7M4L6 MIR6089-201ENST00000616698 64 ntBASIC20.96■□□□□ 0.95
SHFQ7M4L6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.96■□□□□ 0.95
SHFQ7M4L6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHFQ7M4L6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHFQ7M4L6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHFQ7M4L6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHFQ7M4L6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SHFQ7M4L6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHFQ7M4L6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
SHFQ7M4L6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
SHFQ7M4L6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHFQ7M4L6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.94■□□□□ 0.94
SHFQ7M4L6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.94■□□□□ 0.94
SHFQ7M4L6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHFQ7M4L6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SHFQ7M4L6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.93■□□□□ 0.94
SHFQ7M4L6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHFQ7M4L6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SHFQ7M4L6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.93■□□□□ 0.94
SHFQ7M4L6 HLA-L-211ENST00000482052 1765 ntBASIC20.92■□□□□ 0.94
SHFQ7M4L6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHFQ7M4L6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHFQ7M4L6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.92■□□□□ 0.94
SHFQ7M4L6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.92■□□□□ 0.94
SHFQ7M4L6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHFQ7M4L6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.92■□□□□ 0.94
SHFQ7M4L6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHFQ7M4L6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.92■□□□□ 0.94
SHFQ7M4L6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHFQ7M4L6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SHFQ7M4L6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHFQ7M4L6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHFQ7M4L6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHFQ7M4L6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHFQ7M4L6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SHFQ7M4L6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHFQ7M4L6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHFQ7M4L6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.9■□□□□ 0.94
SHFQ7M4L6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHFQ7M4L6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHFQ7M4L6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHFQ7M4L6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SHFQ7M4L6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SHFQ7M4L6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHFQ7M4L6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHFQ7M4L6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.9■□□□□ 0.94
SHFQ7M4L6 AC093536.1-201ENST00000569153 554 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms