Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144NLQ6NUI1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144NLQ6NUI1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC144NLQ6NUI1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC144NLQ6NUI1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144NLQ6NUI1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC144NLQ6NUI1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144NLQ6NUI1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
CCDC144NLQ6NUI1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144NLQ6NUI1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 RARRES2P1-201ENST00000474487 481 ntBASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 AC103724.3-201ENST00000564481 992 ntBASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144NLQ6NUI1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144NLQ6NUI1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144NLQ6NUI1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144NLQ6NUI1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144NLQ6NUI1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC144NLQ6NUI1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC144NLQ6NUI1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC144NLQ6NUI1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144NLQ6NUI1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144NLQ6NUI1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144NLQ6NUI1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144NLQ6NUI1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144NLQ6NUI1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144NLQ6NUI1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144NLQ6NUI1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 MIR4281-201ENST00000580852 62 ntBASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144NLQ6NUI1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144NLQ6NUI1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC144NLQ6NUI1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144NLQ6NUI1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144NLQ6NUI1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144NLQ6NUI1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144NLQ6NUI1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC144NLQ6NUI1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC144NLQ6NUI1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms