Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RNF213Q63HN8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF213Q63HN8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF213Q63HN8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF213Q63HN8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RNF213Q63HN8 AC099791.1-201ENST00000416440 715 ntBASIC12.81□□□□□ -0.36
RNF213Q63HN8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
RNF213Q63HN8 AC004448.1-201ENST00000458332 883 ntBASIC12.81□□□□□ -0.36
RNF213Q63HN8 KRT18P6-201ENST00000555540 1265 ntBASIC12.81□□□□□ -0.36
RNF213Q63HN8 AC080038.1-201ENST00000611274 1154 ntBASIC12.81□□□□□ -0.36
RNF213Q63HN8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF213Q63HN8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF213Q63HN8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF213Q63HN8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF213Q63HN8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF213Q63HN8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RNF213Q63HN8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RNF213Q63HN8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 AC008764.7-201ENST00000593779 1081 ntBASIC12.8□□□□□ -0.36
RNF213Q63HN8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RNF213Q63HN8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.8□□□□□ -0.36
RNF213Q63HN8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF213Q63HN8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
RNF213Q63HN8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.8□□□□□ -0.36
RNF213Q63HN8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF213Q63HN8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF213Q63HN8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF213Q63HN8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 AC233992.3-201ENST00000607491 485 ntBASIC12.79□□□□□ -0.36
RNF213Q63HN8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF213Q63HN8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RNF213Q63HN8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF213Q63HN8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF213Q63HN8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF213Q63HN8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF213Q63HN8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF213Q63HN8 AC027612.3-201ENST00000413684 1047 ntBASIC12.78□□□□□ -0.36
RNF213Q63HN8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF213Q63HN8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.77□□□□□ -0.36
RNF213Q63HN8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC12.77□□□□□ -0.36
RNF213Q63HN8 AC026185.1-201ENST00000445748 174 ntBASIC12.77□□□□□ -0.36
RNF213Q63HN8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RNF213Q63HN8 SMUG1P1-201ENST00000590640 811 ntBASIC12.77□□□□□ -0.36
RNF213Q63HN8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RNF213Q63HN8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RNF213Q63HN8 AC006015.1-201ENST00000429970 570 ntBASIC12.77□□□□□ -0.37
RNF213Q63HN8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RNF213Q63HN8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.77□□□□□ -0.37
RNF213Q63HN8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RNF213Q63HN8 NCF1B-203ENST00000435988 1254 ntBASIC12.77□□□□□ -0.37
RNF213Q63HN8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC12.77□□□□□ -0.37
RNF213Q63HN8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC12.77□□□□□ -0.37
RNF213Q63HN8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 NTF6G-201ENST00000591094 616 ntBASIC12.76□□□□□ -0.37
RNF213Q63HN8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC12.76□□□□□ -0.37
RNF213Q63HN8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RNF213Q63HN8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF213Q63HN8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.75□□□□□ -0.37
RNF213Q63HN8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF213Q63HN8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.75□□□□□ -0.37
RNF213Q63HN8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF213Q63HN8 DUX4L19-201ENST00000557448 1267 ntBASIC12.75□□□□□ -0.37
RNF213Q63HN8 TERF1P2-201ENST00000583350 1212 ntBASIC12.75□□□□□ -0.37
RNF213Q63HN8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.75□□□□□ -0.37
RNF213Q63HN8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF213Q63HN8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RNF213Q63HN8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RNF213Q63HN8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF213Q63HN8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF213Q63HN8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RNF213Q63HN8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF213Q63HN8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms