Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 ATG18YFR021W 1503 nt4.46□□□□□ -1.7
MSA1Q08471 VTH1YIL173W 4650 nt4.45□□□□□ -1.7
MSA1Q08471 VTH2YJL222W 4650 nt4.45□□□□□ -1.7
MSA1Q08471 TAX4YJL083W 1815 nt4.45□□□□□ -1.7
MSA1Q08471 YFR052C-AYFR052C-A 306 nt4.45□□□□□ -1.7
MSA1Q08471 HSX1tR(CCU)J 72 nt4.45□□□□□ -1.7
MSA1Q08471 RHO3YIL118W 696 nt4.45□□□□□ -1.7
MSA1Q08471 DJP1YIR004W 1299 nt4.45□□□□□ -1.7
MSA1Q08471 YKL107WYKL107W 930 nt4.45□□□□□ -1.7
MSA1Q08471 PFA3YNL326C 1011 nt4.45□□□□□ -1.7
MSA1Q08471 NDC1YML031W 1968 nt4.45□□□□□ -1.7
MSA1Q08471 MNN2YBR015C 1794 nt4.45□□□□□ -1.7
MSA1Q08471 GIT1YCR098C 1557 nt4.44□□□□□ -1.7
MSA1Q08471 ENT2YLR206W 1842 nt4.44□□□□□ -1.7
MSA1Q08471 SNF11YDR073W 510 nt4.44□□□□□ -1.7
MSA1Q08471 SLO1YER180C-A 258 nt4.44□□□□□ -1.7
MSA1Q08471 PDE1YGL248W 1110 nt4.44□□□□□ -1.7
MSA1Q08471 SUP2tY(GUA)D 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP11tY(GUA)F1 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP6tY(GUA)F2 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP7tY(GUA)J1 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP4tY(GUA)J2 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP5tY(GUA)M1 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP8tY(GUA)M2 75 nt4.44□□□□□ -1.7
MSA1Q08471 SUP3tY(GUA)O 75 nt4.44□□□□□ -1.7
MSA1Q08471 APS3YJL024C 585 nt4.44□□□□□ -1.7
MSA1Q08471 PHO86YJL117W 936 nt4.44□□□□□ -1.7
MSA1Q08471 YEH1YLL012W 1722 nt4.43□□□□□ -1.7
MSA1Q08471 MID1YNL291C 1647 nt4.43□□□□□ -1.7
MSA1Q08471 HOF1YMR032W 2010 nt4.43□□□□□ -1.7
MSA1Q08471 PRP46YPL151C 1356 nt4.43□□□□□ -1.7
MSA1Q08471 UBX2YML013W 1755 nt4.43□□□□□ -1.7
MSA1Q08471 PDC1YLR044C 1692 nt4.43□□□□□ -1.7
MSA1Q08471 PRO3YER023W 861 nt4.43□□□□□ -1.7
MSA1Q08471 RPT6YGL048C 1218 nt4.43□□□□□ -1.7
MSA1Q08471 ATG17YLR423C 1254 nt4.43□□□□□ -1.7
MSA1Q08471 YNL296WYNL296W 315 nt4.43□□□□□ -1.7
MSA1Q08471 PIN2YOR104W 849 nt4.43□□□□□ -1.7
MSA1Q08471 NPT1YOR209C 1290 nt4.43□□□□□ -1.7
MSA1Q08471 YOR318CYOR318C 306 nt4.43□□□□□ -1.7
MSA1Q08471 SAM4YPL273W 978 nt4.43□□□□□ -1.7
MSA1Q08471 RRN3YKL125W 1884 nt4.43□□□□□ -1.7
MSA1Q08471 APM4YOL062C 1476 nt4.43□□□□□ -1.7
MSA1Q08471 MPP10YJR002W 1782 nt4.42□□□□□ -1.7
MSA1Q08471 MCM3YEL032W 2916 nt4.42□□□□□ -1.7
MSA1Q08471 COX26YDR119W-A 201 nt4.42□□□□□ -1.7
MSA1Q08471 URA3YEL021W 804 nt4.42□□□□□ -1.7
MSA1Q08471 ADK2YER170W 678 nt4.42□□□□□ -1.7
MSA1Q08471 YRF1-4YLR466W 4149 nt4.42□□□□□ -1.7
MSA1Q08471 URA7YBL039C 1740 nt4.42□□□□□ -1.7
MSA1Q08471 ENV9YOR246C 993 nt4.42□□□□□ -1.7
MSA1Q08471 snR32snR32 188 nt4.42□□□□□ -1.7
MSA1Q08471 CLP1YOR250C 1338 nt4.42□□□□□ -1.7
MSA1Q08471 RAD3YER171W 2337 nt4.41□□□□□ -1.7
MSA1Q08471 VMA13YPR036W 1437 nt4.41□□□□□ -1.7
MSA1Q08471 MMP1YLL061W 1752 nt4.41□□□□□ -1.7
MSA1Q08471 GET3YDL100C 1065 nt4.41□□□□□ -1.7
MSA1Q08471 YDR053WYDR053W 396 nt4.41□□□□□ -1.7
MSA1Q08471 CAD1YDR423C 1230 nt4.41□□□□□ -1.7
MSA1Q08471 LYS12YIL094C 1116 nt4.41□□□□□ -1.7
MSA1Q08471 ATP14YLR295C 375 nt4.41□□□□□ -1.7
MSA1Q08471 YOL097W-AYOL097W-A 186 nt4.41□□□□□ -1.7
MSA1Q08471 COT1YOR316C 1320 nt4.41□□□□□ -1.7
MSA1Q08471 ERC1YHR032W 1746 nt4.41□□□□□ -1.7
MSA1Q08471 ARB1YER036C 1833 nt4.4□□□□□ -1.7
MSA1Q08471 YNR040WYNR040W 771 nt4.4□□□□□ -1.71
MSA1Q08471 SMF2YHR050W 1650 nt4.4□□□□□ -1.71
MSA1Q08471 RAD53YPL153C 2466 nt4.4□□□□□ -1.71
MSA1Q08471 ASF2YDL197C 1578 nt4.4□□□□□ -1.71
MSA1Q08471 HSP78YDR258C 2436 nt4.4□□□□□ -1.71
MSA1Q08471 ACC1YNR016C 6702 nt4.39□□□□□ -1.71
MSA1Q08471 SPG4YMR107W 348 nt4.39□□□□□ -1.71
MSA1Q08471 CSG2YBR036C 1233 nt4.39□□□□□ -1.71
MSA1Q08471 ECM2YBR065C 1095 nt4.39□□□□□ -1.71
MSA1Q08471 ACS2YLR153C 2052 nt4.39□□□□□ -1.71
MSA1Q08471 QDR3YBR043C 2070 nt4.39□□□□□ -1.71
MSA1Q08471 DBF4YDR052C 2115 nt4.39□□□□□ -1.71
MSA1Q08471 EEB1YPL095C 1371 nt4.39□□□□□ -1.71
MSA1Q08471 YNL095CYNL095C 1929 nt4.38□□□□□ -1.71
MSA1Q08471 IPK1YDR315C 846 nt4.38□□□□□ -1.71
MSA1Q08471 UTR4YEL038W 684 nt4.38□□□□□ -1.71
MSA1Q08471 SIP2YGL208W 1248 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)CtN(GUU)C 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)FtN(GUU)F 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)GtN(GUU)G 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)KtN(GUU)K 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)LtN(GUU)L 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)N1tN(GUU)N1 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)N2tN(GUU)N2 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)O1tN(GUU)O1 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)O2tN(GUU)O2 74 nt4.38□□□□□ -1.71
MSA1Q08471 tN(GUU)PtN(GUU)P 74 nt4.38□□□□□ -1.71
MSA1Q08471 YHR145CYHR145C 357 nt4.38□□□□□ -1.71
MSA1Q08471 COS9YKL219W 1224 nt4.38□□□□□ -1.71
MSA1Q08471 BUD14YAR014C 2130 nt4.38□□□□□ -1.71
MSA1Q08471 RPT2YDL007W 1314 nt4.38□□□□□ -1.71
MSA1Q08471 YML082WYML082W 1950 nt4.38□□□□□ -1.71
MSA1Q08471 DBF2YGR092W 1719 nt4.38□□□□□ -1.71
MSA1Q08471 PWP1YLR196W 1731 nt4.38□□□□□ -1.71
MSA1Q08471 SIA1YOR137C 1869 nt4.37□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms