Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 PCL1YNL289W 840 nt5.3□□□□□ -1.56
VPS13Q07878 RQC1YDR333C 2172 nt5.3□□□□□ -1.56
VPS13Q07878 GMC1YDR506C 1827 nt5.3□□□□□ -1.56
VPS13Q07878 YJR124CYJR124C 1347 nt5.29□□□□□ -1.56
VPS13Q07878 PIC2YER053C 903 nt5.29□□□□□ -1.56
VPS13Q07878 MOD5YOR274W 1287 nt5.29□□□□□ -1.56
VPS13Q07878 LYP1YNL268W 1836 nt5.29□□□□□ -1.56
VPS13Q07878 KEX1YGL203C 2190 nt5.28□□□□□ -1.56
VPS13Q07878 SIF2YBR103W 1608 nt5.28□□□□□ -1.56
VPS13Q07878 RGS2YOR107W 930 nt5.28□□□□□ -1.56
VPS13Q07878 MLC2YPR188C 492 nt5.28□□□□□ -1.56
VPS13Q07878 STB5YHR178W 2232 nt5.28□□□□□ -1.56
VPS13Q07878 QRI1YDL103C 1434 nt5.27□□□□□ -1.57
VPS13Q07878 MRS3YJL133W 945 nt5.27□□□□□ -1.57
VPS13Q07878 PRS1YKL181W 1284 nt5.27□□□□□ -1.57
VPS13Q07878 PRP24YMR268C 1335 nt5.26□□□□□ -1.57
VPS13Q07878 ENT2YLR206W 1842 nt5.26□□□□□ -1.57
VPS13Q07878 BAP2YBR068C 1830 nt5.26□□□□□ -1.57
VPS13Q07878 ERG12YMR208W 1332 nt5.26□□□□□ -1.57
VPS13Q07878 ALD3YMR169C 1521 nt5.26□□□□□ -1.57
VPS13Q07878 ALD2YMR170C 1521 nt5.26□□□□□ -1.57
VPS13Q07878 MID1YNL291C 1647 nt5.26□□□□□ -1.57
VPS13Q07878 IFA38YBR159W 1044 nt5.26□□□□□ -1.57
VPS13Q07878 SPR6YER115C 576 nt5.26□□□□□ -1.57
VPS13Q07878 BUD7YOR299W 2241 nt5.25□□□□□ -1.57
VPS13Q07878 YPL278CYPL278C 303 nt5.25□□□□□ -1.57
VPS13Q07878 THP1YOL072W 1368 nt5.24□□□□□ -1.57
VPS13Q07878 MND2YIR025W 1107 nt5.24□□□□□ -1.57
VPS13Q07878 DCC1YCL016C 1143 nt5.24□□□□□ -1.57
VPS13Q07878 VAN1YML115C 1608 nt5.24□□□□□ -1.57
VPS13Q07878 FET4YMR319C 1659 nt5.24□□□□□ -1.57
VPS13Q07878 ECM3YOR092W 1842 nt5.24□□□□□ -1.57
VPS13Q07878 OAC1YKL120W 975 nt5.24□□□□□ -1.57
VPS13Q07878 MID2YLR332W 1131 nt5.23□□□□□ -1.57
VPS13Q07878 YGR068W-AYGR068W-A 96 nt5.23□□□□□ -1.57
VPS13Q07878 NSG1YHR133C 876 nt5.23□□□□□ -1.57
VPS13Q07878 CIR2YOR356W 1896 nt5.23□□□□□ -1.57
VPS13Q07878 HRP1YOL123W 1605 nt5.22□□□□□ -1.57
VPS13Q07878 PLP2YOR281C 861 nt5.22□□□□□ -1.57
VPS13Q07878 YGL214WYGL214W 486 nt5.21□□□□□ -1.57
VPS13Q07878 SSK1YLR006C 2139 nt5.21□□□□□ -1.57
VPS13Q07878 ATE1YGL017W 1512 nt5.21□□□□□ -1.58
VPS13Q07878 SYP1YCR030C 2613 nt5.21□□□□□ -1.58
VPS13Q07878 ATP1YBL099W 1638 nt5.21□□□□□ -1.58
VPS13Q07878 APS1YLR170C 471 nt5.21□□□□□ -1.58
VPS13Q07878 SCO2YBR024W 906 nt5.21□□□□□ -1.58
VPS13Q07878 tC(GCA)BtC(GCA)B 72 nt5.21□□□□□ -1.58
VPS13Q07878 tC(GCA)GtC(GCA)G 72 nt5.21□□□□□ -1.58
VPS13Q07878 tC(GCA)P1tC(GCA)P1 72 nt5.21□□□□□ -1.58
VPS13Q07878 tC(GCA)P2tC(GCA)P2 72 nt5.21□□□□□ -1.58
VPS13Q07878 FUN19YAL034C 1242 nt5.21□□□□□ -1.58
VPS13Q07878 RPL21BYPL079W 483 nt5.21□□□□□ -1.58
VPS13Q07878 HXT15YDL245C 1704 nt5.21□□□□□ -1.58
VPS13Q07878 HXT16YJR158W 1704 nt5.21□□□□□ -1.58
VPS13Q07878 YOR389WYOR389W 1875 nt5.2□□□□□ -1.58
VPS13Q07878 YML133CYML133C 4125 nt5.2□□□□□ -1.58
VPS13Q07878 YCR023CYCR023C 1836 nt5.2□□□□□ -1.58
VPS13Q07878 OTU1YFL044C 906 nt5.2□□□□□ -1.58
VPS13Q07878 NMD4YLR363C 657 nt5.2□□□□□ -1.58
VPS13Q07878 MDG1YNL173C 1101 nt5.2□□□□□ -1.58
VPS13Q07878 RCR2YDR003W 633 nt5.2□□□□□ -1.58
VPS13Q07878 UMP1YBR173C 447 nt5.2□□□□□ -1.58
VPS13Q07878 QDR1YIL120W 1692 nt5.2□□□□□ -1.58
VPS13Q07878 MAL13YGR288W 1422 nt5.19□□□□□ -1.58
VPS13Q07878 PPS1YBR276C 2424 nt5.19□□□□□ -1.58
VPS13Q07878 ICY2YPL250C 411 nt5.19□□□□□ -1.58
VPS13Q07878 YPR169W-AYPR169W-A 219 nt5.19□□□□□ -1.58
VPS13Q07878 YPR170W-BYPR170W-B 258 nt5.19□□□□□ -1.58
VPS13Q07878 YGL063C-AYGL063C-A 150 nt5.19□□□□□ -1.58
VPS13Q07878 COX4YGL187C 468 nt5.19□□□□□ -1.58
VPS13Q07878 MTF1YMR228W 1026 nt5.19□□□□□ -1.58
VPS13Q07878 FRT2YAL028W 1587 nt5.18□□□□□ -1.58
VPS13Q07878 AIF1YNR074C 1137 nt5.18□□□□□ -1.58
VPS13Q07878 GPM3YOL056W 912 nt5.18□□□□□ -1.58
VPS13Q07878 RFC1YOR217W 2586 nt5.18□□□□□ -1.58
VPS13Q07878 RDN37-1RDN37-1 5354 nt5.17□□□□□ -1.58
VPS13Q07878 RDN37-2RDN37-2 5354 nt5.17□□□□□ -1.58
VPS13Q07878 AAD10YJR155W 867 nt5.17□□□□□ -1.58
VPS13Q07878 DPB4YDR121W 591 nt5.17□□□□□ -1.58
VPS13Q07878 CIN5YOR028C 888 nt5.17□□□□□ -1.58
VPS13Q07878 SRF1YDL133W 1314 nt5.16□□□□□ -1.58
VPS13Q07878 YDR282CYDR282C 1245 nt5.16□□□□□ -1.58
VPS13Q07878 RPB7YDR404C 516 nt5.16□□□□□ -1.58
VPS13Q07878 YDR445CYDR445C 408 nt5.16□□□□□ -1.58
VPS13Q07878 NOP16YER002W 696 nt5.16□□□□□ -1.58
VPS13Q07878 ICS3YJL077C 396 nt5.16□□□□□ -1.58
VPS13Q07878 YPL077CYPL077C 723 nt5.16□□□□□ -1.58
VPS13Q07878 YPR174CYPR174C 666 nt5.16□□□□□ -1.58
VPS13Q07878 YFL042CYFL042C 2025 nt5.16□□□□□ -1.58
VPS13Q07878 NGR1YBR212W 2019 nt5.16□□□□□ -1.58
VPS13Q07878 IMA2YOL157C 1770 nt5.15□□□□□ -1.58
VPS13Q07878 GPI11YDR302W 660 nt5.15□□□□□ -1.59
VPS13Q07878 SAP30YMR263W 606 nt5.15□□□□□ -1.59
VPS13Q07878 HXT4YHR092C 1731 nt5.15□□□□□ -1.59
VPS13Q07878 BPL1YDL141W 2073 nt5.15□□□□□ -1.59
VPS13Q07878 YPL191CYPL191C 1083 nt5.14□□□□□ -1.59
VPS13Q07878 YDR541CYDR541C 1035 nt5.14□□□□□ -1.59
VPS13Q07878 YPT32YGL210W 669 nt5.14□□□□□ -1.59
VPS13Q07878 MET16YPR167C 786 nt5.14□□□□□ -1.59
VPS13Q07878 GLN3YER040W 2193 nt5.14□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms