Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AF131216.4-201ENST00000638924 1588 ntBASIC18.27■□□□□ 0.52
CFHR3Q02985 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR3Q02985 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR3Q02985 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR3Q02985 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.27■□□□□ 0.52
CFHR3Q02985 AC021242.3-201ENST00000607598 1377 ntBASIC18.27■□□□□ 0.51
CFHR3Q02985 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFHR3Q02985 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CFHR3Q02985 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CFHR3Q02985 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CFHR3Q02985 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.26■□□□□ 0.51
CFHR3Q02985 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR3Q02985 AC239859.2-201ENST00000444165 318 ntBASIC18.26■□□□□ 0.51
CFHR3Q02985 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CFHR3Q02985 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CFHR3Q02985 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR3Q02985 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR3Q02985 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR3Q02985 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR3Q02985 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR3Q02985 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR3Q02985 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CFHR3Q02985 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR3Q02985 GUSBP5-201ENST00000418136 578 ntBASIC18.25■□□□□ 0.51
CFHR3Q02985 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR3Q02985 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR3Q02985 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR3Q02985 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.24■□□□□ 0.51
CFHR3Q02985 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.24■□□□□ 0.51
CFHR3Q02985 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFHR3Q02985 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.24■□□□□ 0.51
CFHR3Q02985 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFHR3Q02985 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CFHR3Q02985 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.24■□□□□ 0.51
CFHR3Q02985 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFHR3Q02985 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CFHR3Q02985 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.24■□□□□ 0.51
CFHR3Q02985 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.24■□□□□ 0.51
CFHR3Q02985 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.24■□□□□ 0.51
CFHR3Q02985 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.24■□□□□ 0.51
CFHR3Q02985 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFHR3Q02985 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFHR3Q02985 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CFHR3Q02985 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.23■□□□□ 0.51
CFHR3Q02985 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.23■□□□□ 0.51
CFHR3Q02985 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CFHR3Q02985 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.23■□□□□ 0.51
CFHR3Q02985 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.23■□□□□ 0.51
CFHR3Q02985 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 AC022211.4-201ENST00000625094 2161 ntBASIC18.23■□□□□ 0.51
CFHR3Q02985 KRT125P-201ENST00000546827 989 ntBASIC18.23■□□□□ 0.51
CFHR3Q02985 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFHR3Q02985 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CFHR3Q02985 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.22■□□□□ 0.51
CFHR3Q02985 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFHR3Q02985 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.21■□□□□ 0.51
CFHR3Q02985 MIR4787-201ENST00000607364 84 ntBASIC18.21■□□□□ 0.51
CFHR3Q02985 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFHR3Q02985 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CFHR3Q02985 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CFHR3Q02985 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFHR3Q02985 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFHR3Q02985 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CFHR3Q02985 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
CFHR3Q02985 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFHR3Q02985 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.2■□□□□ 0.5
CFHR3Q02985 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.2■□□□□ 0.5
CFHR3Q02985 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.2■□□□□ 0.5
CFHR3Q02985 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFHR3Q02985 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFHR3Q02985 AC020928.2-201ENST00000588717 2197 ntBASIC18.2■□□□□ 0.5
CFHR3Q02985 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFHR3Q02985 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFHR3Q02985 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFHR3Q02985 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CFHR3Q02985 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms