Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTA1P68133 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTA1P68133 HLA-L-211ENST00000482052 1765 ntBASIC20.75■□□□□ 0.91
ACTA1P68133 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTA1P68133 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTA1P68133 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTA1P68133 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTA1P68133 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ACTA1P68133 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ACTA1P68133 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
ACTA1P68133 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.74■□□□□ 0.91
ACTA1P68133 AC016575.1-201ENST00000607026 382 ntBASIC20.74■□□□□ 0.91
ACTA1P68133 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ACTA1P68133 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ACTA1P68133 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTA1P68133 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTA1P68133 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ACTA1P68133 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.73■□□□□ 0.91
ACTA1P68133 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTA1P68133 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ACTA1P68133 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTA1P68133 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACTA1P68133 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACTA1P68133 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACTA1P68133 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTA1P68133 KRT18P10-201ENST00000388836 1287 ntBASIC20.72■□□□□ 0.91
ACTA1P68133 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACTA1P68133 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
ACTA1P68133 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTA1P68133 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACTA1P68133 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ACTA1P68133 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.71■□□□□ 0.91
ACTA1P68133 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.71■□□□□ 0.91
ACTA1P68133 RP9P-202ENST00000450133 1212 ntBASIC20.71■□□□□ 0.91
ACTA1P68133 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTA1P68133 AC092296.2-201ENST00000589470 999 ntBASIC20.71■□□□□ 0.91
ACTA1P68133 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTA1P68133 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ACTA1P68133 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.71■□□□□ 0.91
ACTA1P68133 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTA1P68133 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACTA1P68133 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
ACTA1P68133 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTA1P68133 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.7■□□□□ 0.9
ACTA1P68133 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ACTA1P68133 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTA1P68133 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACTA1P68133 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACTA1P68133 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.7■□□□□ 0.9
ACTA1P68133 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ACTA1P68133 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTA1P68133 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ACTA1P68133 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTA1P68133 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ACTA1P68133 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTA1P68133 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACTA1P68133 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ACTA1P68133 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTA1P68133 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTA1P68133 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTA1P68133 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTA1P68133 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ACTA1P68133 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
ACTA1P68133 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 FOXO3B-201ENST00000395675 1928 ntBASIC20.68■□□□□ 0.9
ACTA1P68133 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTA1P68133 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
ACTA1P68133 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ACTA1P68133 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACTA1P68133 ECEL1P2-201ENST00000461596 1295 ntBASIC20.67■□□□□ 0.9
ACTA1P68133 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
ACTA1P68133 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACTA1P68133 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACTA1P68133 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
ACTA1P68133 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACTA1P68133 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ACTA1P68133 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTA1P68133 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTA1P68133 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTA1P68133 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
ACTA1P68133 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTA1P68133 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ACTA1P68133 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ACTA1P68133 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.65■□□□□ 0.9
ACTA1P68133 AC093536.1-201ENST00000569153 554 ntBASIC20.65■□□□□ 0.9
ACTA1P68133 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms