Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM6P62312 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM6P62312 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.5■□□□□ 0.87
LSM6P62312 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.5■□□□□ 0.87
LSM6P62312 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
LSM6P62312 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM6P62312 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM6P62312 AC139795.1-202ENST00000500444 432 ntBASIC20.49■□□□□ 0.87
LSM6P62312 DUX4L18-201ENST00000553347 1267 ntBASIC20.49■□□□□ 0.87
LSM6P62312 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.49■□□□□ 0.87
LSM6P62312 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LSM6P62312 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM6P62312 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.48■□□□□ 0.87
LSM6P62312 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM6P62312 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM6P62312 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LSM6P62312 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.48■□□□□ 0.87
LSM6P62312 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM6P62312 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM6P62312 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM6P62312 ATP5G2P3-201ENST00000429083 425 ntBASIC20.47■□□□□ 0.87
LSM6P62312 AC022616.5-201ENST00000518796 181 ntBASIC20.47■□□□□ 0.87
LSM6P62312 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.47■□□□□ 0.87
LSM6P62312 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM6P62312 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM6P62312 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM6P62312 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM6P62312 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.46■□□□□ 0.87
LSM6P62312 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM6P62312 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM6P62312 AC004987.1-201ENST00000428627 508 ntBASIC20.46■□□□□ 0.87
LSM6P62312 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LSM6P62312 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM6P62312 AC074183.2-201ENST00000623112 922 ntBASIC20.46■□□□□ 0.87
LSM6P62312 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LSM6P62312 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LSM6P62312 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.45■□□□□ 0.87
LSM6P62312 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.45■□□□□ 0.86
LSM6P62312 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LSM6P62312 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM6P62312 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.44■□□□□ 0.86
LSM6P62312 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 TSPY13P-201ENST00000338964 914 ntBASIC20.44■□□□□ 0.86
LSM6P62312 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LSM6P62312 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM6P62312 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSM6P62312 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LSM6P62312 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.43■□□□□ 0.86
LSM6P62312 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LSM6P62312 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM6P62312 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LSM6P62312 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
LSM6P62312 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM6P62312 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM6P62312 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.42■□□□□ 0.86
LSM6P62312 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LSM6P62312 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.42■□□□□ 0.86
LSM6P62312 BHLHE23-202ENST00000612929 1109 ntBASIC20.42■□□□□ 0.86
LSM6P62312 AC011551.1-201ENST00000614101 683 ntBASIC20.42■□□□□ 0.86
LSM6P62312 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
LSM6P62312 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
LSM6P62312 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM6P62312 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.41■□□□□ 0.86
LSM6P62312 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LSM6P62312 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.41■□□□□ 0.86
LSM6P62312 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LSM6P62312 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM6P62312 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.4■□□□□ 0.86
LSM6P62312 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms