Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CXCR4P61073 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CXCR4P61073 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CXCR4P61073 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CXCR4P61073 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CXCR4P61073 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.26■□□□□ 0.99
CXCR4P61073 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.26■□□□□ 0.99
CXCR4P61073 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.26■□□□□ 0.99
CXCR4P61073 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCR4P61073 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.25■□□□□ 0.99
CXCR4P61073 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CXCR4P61073 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.25■□□□□ 0.99
CXCR4P61073 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.25■□□□□ 0.99
CXCR4P61073 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.25■□□□□ 0.99
CXCR4P61073 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CXCR4P61073 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXCR4P61073 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.24■□□□□ 0.99
CXCR4P61073 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.24■□□□□ 0.99
CXCR4P61073 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXCR4P61073 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CXCR4P61073 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXCR4P61073 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.24■□□□□ 0.99
CXCR4P61073 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CXCR4P61073 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CXCR4P61073 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
CXCR4P61073 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 AC233723.2-201ENST00000623798 2106 ntBASIC21.23■□□□□ 0.99
CXCR4P61073 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CXCR4P61073 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXCR4P61073 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CXCR4P61073 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXCR4P61073 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXCR4P61073 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXCR4P61073 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.22■□□□□ 0.99
CXCR4P61073 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXCR4P61073 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CXCR4P61073 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CXCR4P61073 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
CXCR4P61073 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CXCR4P61073 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXCR4P61073 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.21■□□□□ 0.99
CXCR4P61073 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CXCR4P61073 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CXCR4P61073 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CXCR4P61073 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXCR4P61073 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXCR4P61073 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CXCR4P61073 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.2■□□□□ 0.98
CXCR4P61073 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXCR4P61073 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CXCR4P61073 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CXCR4P61073 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.2■□□□□ 0.98
CXCR4P61073 AC126177.7-201ENST00000547904 679 ntBASIC21.2■□□□□ 0.98
CXCR4P61073 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CXCR4P61073 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.2■□□□□ 0.98
CXCR4P61073 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.2■□□□□ 0.98
CXCR4P61073 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.2■□□□□ 0.98
CXCR4P61073 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXCR4P61073 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CXCR4P61073 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXCR4P61073 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXCR4P61073 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.19■□□□□ 0.98
CXCR4P61073 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.19■□□□□ 0.98
CXCR4P61073 CR559946.2-201ENST00000623684 991 ntBASIC21.19■□□□□ 0.98
CXCR4P61073 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXCR4P61073 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXCR4P61073 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXCR4P61073 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CXCR4P61073 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CXCR4P61073 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.18■□□□□ 0.98
CXCR4P61073 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CXCR4P61073 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXCR4P61073 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CXCR4P61073 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.18■□□□□ 0.98
CXCR4P61073 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.18■□□□□ 0.98
CXCR4P61073 LINC00565-201ENST00000562710 2331 ntBASIC21.18■□□□□ 0.98
CXCR4P61073 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CXCR4P61073 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CXCR4P61073 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CXCR4P61073 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CXCR4P61073 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms