Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CDH4P55283 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDH4P55283 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDH4P55283 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDH4P55283 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.98■■□□□ 1.43
CDH4P55283 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CDH4P55283 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.98■■□□□ 1.43
CDH4P55283 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.98■■□□□ 1.43
CDH4P55283 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.98■■□□□ 1.43
CDH4P55283 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
CDH4P55283 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.98■■□□□ 1.43
CDH4P55283 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.98■■□□□ 1.43
CDH4P55283 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDH4P55283 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDH4P55283 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.97■■□□□ 1.43
CDH4P55283 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDH4P55283 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDH4P55283 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDH4P55283 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.97■■□□□ 1.43
CDH4P55283 KRT125P-201ENST00000546827 989 ntBASIC23.97■■□□□ 1.43
CDH4P55283 AC022211.4-201ENST00000625094 2161 ntBASIC23.97■■□□□ 1.43
CDH4P55283 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDH4P55283 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.96■■□□□ 1.43
CDH4P55283 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.96■■□□□ 1.43
CDH4P55283 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH4P55283 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDH4P55283 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.96■■□□□ 1.43
CDH4P55283 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDH4P55283 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDH4P55283 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH4P55283 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CDH4P55283 AF131216.4-201ENST00000638924 1588 ntBASIC23.95■■□□□ 1.43
CDH4P55283 AC021242.3-201ENST00000607598 1377 ntBASIC23.95■■□□□ 1.42
CDH4P55283 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDH4P55283 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.95■■□□□ 1.42
CDH4P55283 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH4P55283 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH4P55283 AC020928.2-201ENST00000588717 2197 ntBASIC23.94■■□□□ 1.42
CDH4P55283 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CDH4P55283 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH4P55283 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH4P55283 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDH4P55283 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.93■■□□□ 1.42
CDH4P55283 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDH4P55283 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.93■■□□□ 1.42
CDH4P55283 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDH4P55283 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CDH4P55283 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDH4P55283 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDH4P55283 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 MIR4787-201ENST00000607364 84 ntBASIC23.92■■□□□ 1.42
CDH4P55283 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH4P55283 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 GUSBP5-201ENST00000418136 578 ntBASIC23.91■■□□□ 1.42
CDH4P55283 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.91■■□□□ 1.42
CDH4P55283 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.91■■□□□ 1.42
CDH4P55283 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.91■■□□□ 1.42
CDH4P55283 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.91■■□□□ 1.42
CDH4P55283 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH4P55283 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH4P55283 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH4P55283 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.9■■□□□ 1.42
CDH4P55283 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.9■■□□□ 1.42
CDH4P55283 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH4P55283 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDH4P55283 AC142381.3-201ENST00000568208 1670 ntBASIC23.89■■□□□ 1.42
CDH4P55283 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDH4P55283 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDH4P55283 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDH4P55283 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDH4P55283 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
CDH4P55283 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.88■■□□□ 1.41
CDH4P55283 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.88■■□□□ 1.41
CDH4P55283 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDH4P55283 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CDH4P55283 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.87■■□□□ 1.41
CDH4P55283 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH4P55283 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH4P55283 AP003733.4-201ENST00000623785 1697 ntBASIC23.87■■□□□ 1.41
CDH4P55283 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH4P55283 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH4P55283 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH4P55283 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH4P55283 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH4P55283 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH4P55283 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH4P55283 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms