Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC34P49427 AC008813.1-201ENST00000536597 885 ntBASIC18.34■□□□□ 0.53
CDC34P49427 AC021231.2-201ENST00000594613 730 ntBASIC18.34■□□□□ 0.53
CDC34P49427 MIR6089-201ENST00000616698 64 ntBASIC18.34■□□□□ 0.53
CDC34P49427 AC148477.6-201ENST00000623746 465 ntBASIC18.34■□□□□ 0.53
CDC34P49427 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDC34P49427 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC34P49427 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC34P49427 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC34P49427 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC34P49427 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CDC34P49427 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC34P49427 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CDC34P49427 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC34P49427 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC34P49427 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC34P49427 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC34P49427 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC34P49427 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC34P49427 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDC34P49427 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC34P49427 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC34P49427 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC34P49427 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC34P49427 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC34P49427 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC34P49427 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.31■□□□□ 0.52
CDC34P49427 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC34P49427 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDC34P49427 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC34P49427 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC34P49427 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.3■□□□□ 0.52
CDC34P49427 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC34P49427 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.3■□□□□ 0.52
CDC34P49427 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC34P49427 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC34P49427 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC34P49427 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC34P49427 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC34P49427 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDC34P49427 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CDC34P49427 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 DUX4L29-201ENST00000425409 679 ntBASIC18.29■□□□□ 0.52
CDC34P49427 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
CDC34P49427 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC34P49427 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDC34P49427 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC34P49427 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC34P49427 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDC34P49427 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC34P49427 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDC34P49427 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDC34P49427 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDC34P49427 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.27■□□□□ 0.52
CDC34P49427 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC34P49427 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.27■□□□□ 0.52
CDC34P49427 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC34P49427 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDC34P49427 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDC34P49427 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.27■□□□□ 0.52
CDC34P49427 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.27■□□□□ 0.52
CDC34P49427 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDC34P49427 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.27■□□□□ 0.51
CDC34P49427 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CDC34P49427 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.26■□□□□ 0.51
CDC34P49427 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDC34P49427 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDC34P49427 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDC34P49427 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDC34P49427 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDC34P49427 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDC34P49427 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.26■□□□□ 0.51
CDC34P49427 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDC34P49427 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDC34P49427 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.26■□□□□ 0.51
CDC34P49427 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDC34P49427 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDC34P49427 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDC34P49427 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDC34P49427 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms