Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 DIA3YDL024C 1407 nt5.66□□□□□ -1.5
UPF3P48412 MMS21YEL019C 804 nt5.66□□□□□ -1.5
UPF3P48412 YER186CYER186C 921 nt5.66□□□□□ -1.5
UPF3P48412 YGR176WYGR176W 348 nt5.66□□□□□ -1.5
UPF3P48412 UTP4YDR324C 2331 nt5.65□□□□□ -1.5
UPF3P48412 UBP7YIL156W 3216 nt5.65□□□□□ -1.5
UPF3P48412 GSH2YOL049W 1476 nt5.65□□□□□ -1.5
UPF3P48412 YDL057WYDL057W 987 nt5.65□□□□□ -1.5
UPF3P48412 SNM1YDR478W 597 nt5.65□□□□□ -1.5
UPF3P48412 IRC7YFR055W 1023 nt5.65□□□□□ -1.5
UPF3P48412 ISY1YJR050W 708 nt5.65□□□□□ -1.5
UPF3P48412 STM1YLR150W 822 nt5.65□□□□□ -1.5
UPF3P48412 YPR160C-AYPR160C-A 285 nt5.65□□□□□ -1.5
UPF3P48412 YEH1YLL012W 1722 nt5.65□□□□□ -1.51
UPF3P48412 SKS1YPL026C 1509 nt5.64□□□□□ -1.51
UPF3P48412 SUM1YDR310C 3189 nt5.64□□□□□ -1.51
UPF3P48412 PTK2YJR059W 2457 nt5.64□□□□□ -1.51
UPF3P48412 RPS16BYDL083C 432 nt5.64□□□□□ -1.51
UPF3P48412 ARP10YDR106W 855 nt5.64□□□□□ -1.51
UPF3P48412 SPS18YNL204C 903 nt5.64□□□□□ -1.51
UPF3P48412 AMA1YGR225W 1782 nt5.64□□□□□ -1.51
UPF3P48412 YME1YPR024W 2244 nt5.64□□□□□ -1.51
UPF3P48412 ORC5YNL261W 1440 nt5.64□□□□□ -1.51
UPF3P48412 GAS3YMR215W 1575 nt5.63□□□□□ -1.51
UPF3P48412 KSS1YGR040W 1107 nt5.63□□□□□ -1.51
UPF3P48412 SEC13YLR208W 894 nt5.63□□□□□ -1.51
UPF3P48412 YJR124CYJR124C 1347 nt5.63□□□□□ -1.51
UPF3P48412 MAD3YJL013C 1548 nt5.63□□□□□ -1.51
UPF3P48412 YDL121CYDL121C 450 nt5.62□□□□□ -1.51
UPF3P48412 CHO1YER026C 831 nt5.62□□□□□ -1.51
UPF3P48412 SKI8YGL213C 1194 nt5.62□□□□□ -1.51
UPF3P48412 IPI1YHR085W 1005 nt5.62□□□□□ -1.51
UPF3P48412 LYS12YIL094C 1116 nt5.62□□□□□ -1.51
UPF3P48412 DJP1YIR004W 1299 nt5.62□□□□□ -1.51
UPF3P48412 CPA1YOR303W 1236 nt5.62□□□□□ -1.51
UPF3P48412 MEC3YLR288C 1425 nt5.62□□□□□ -1.51
UPF3P48412 VBA1YMR088C 1689 nt5.62□□□□□ -1.51
UPF3P48412 COX20YDR231C 618 nt5.61□□□□□ -1.51
UPF3P48412 FMP48YGR052W 1110 nt5.61□□□□□ -1.51
UPF3P48412 ATG32YIL146C 1590 nt5.61□□□□□ -1.51
UPF3P48412 MRPL4YLR439W 960 nt5.61□□□□□ -1.51
UPF3P48412 ADE12YNL220W 1302 nt5.61□□□□□ -1.51
UPF3P48412 ALD6YPL061W 1503 nt5.61□□□□□ -1.51
UPF3P48412 APE3YBR286W 1614 nt5.61□□□□□ -1.51
UPF3P48412 YDR109CYDR109C 2148 nt5.6□□□□□ -1.51
UPF3P48412 PRI2YKL045W 1587 nt5.6□□□□□ -1.51
UPF3P48412 IDP1YDL066W 1287 nt5.6□□□□□ -1.51
UPF3P48412 YGR011WYGR011W 327 nt5.6□□□□□ -1.51
UPF3P48412 YMR086C-AYMR086C-A 339 nt5.6□□□□□ -1.51
UPF3P48412 YPL113CYPL113C 1191 nt5.6□□□□□ -1.51
UPF3P48412 YPR109WYPR109W 885 nt5.6□□□□□ -1.51
UPF3P48412 DHH1YDL160C 1521 nt5.59□□□□□ -1.51
UPF3P48412 VHS1YDR247W 1386 nt5.59□□□□□ -1.51
UPF3P48412 YEL028WYEL028W 462 nt5.59□□□□□ -1.51
UPF3P48412 MMS2YGL087C 414 nt5.59□□□□□ -1.51
UPF3P48412 RHO3YIL118W 696 nt5.59□□□□□ -1.51
UPF3P48412 NPA3YJR072C 1158 nt5.59□□□□□ -1.51
UPF3P48412 ENV9YOR246C 993 nt5.59□□□□□ -1.51
UPF3P48412 UBA3YPR066W 900 nt5.59□□□□□ -1.51
UPF3P48412 MLC2YPR188C 492 nt5.59□□□□□ -1.51
UPF3P48412 CST6YIL036W 1764 nt5.59□□□□□ -1.51
UPF3P48412 YIR007WYIR007W 2295 nt5.59□□□□□ -1.51
UPF3P48412 MNS1YJR131W 1650 nt5.59□□□□□ -1.52
UPF3P48412 SIS2YKR072C 1689 nt5.59□□□□□ -1.52
UPF3P48412 MID1YNL291C 1647 nt5.59□□□□□ -1.52
UPF3P48412 FPK1YNR047W 2682 nt5.59□□□□□ -1.52
UPF3P48412 QDR3YBR043C 2070 nt5.59□□□□□ -1.52
UPF3P48412 MET3YJR010W 1536 nt5.58□□□□□ -1.52
UPF3P48412 IMG2YCR071C 441 nt5.58□□□□□ -1.52
UPF3P48412 YER134CYER134C 537 nt5.58□□□□□ -1.52
UPF3P48412 UIP3YAR027W 708 nt5.58□□□□□ -1.52
UPF3P48412 CIN4YMR138W 576 nt5.58□□□□□ -1.52
UPF3P48412 CKA2YOR061W 1020 nt5.58□□□□□ -1.52
UPF3P48412 UBC11YOR339C 471 nt5.58□□□□□ -1.52
UPF3P48412 MRPS5YBR251W 924 nt5.58□□□□□ -1.52
UPF3P48412 RKM4YDR257C 1485 nt5.58□□□□□ -1.52
UPF3P48412 YML082WYML082W 1950 nt5.57□□□□□ -1.52
UPF3P48412 ROG3YFR022W 2202 nt5.57□□□□□ -1.52
UPF3P48412 IXR1YKL032C 1794 nt5.57□□□□□ -1.52
UPF3P48412 IFM1YOL023W 2031 nt5.57□□□□□ -1.52
UPF3P48412 YJL107CYJL107C 1164 nt5.56□□□□□ -1.52
UPF3P48412 ECM1YAL059W 639 nt5.56□□□□□ -1.52
UPF3P48412 ECM19YLR390W 339 nt5.56□□□□□ -1.52
UPF3P48412 PFA3YNL326C 1011 nt5.56□□□□□ -1.52
UPF3P48412 ARG8YOL140W 1272 nt5.56□□□□□ -1.52
UPF3P48412 YPL071CYPL071C 471 nt5.56□□□□□ -1.52
UPF3P48412 YBR144CYBR144C 315 nt5.56□□□□□ -1.52
UPF3P48412 ICE2YIL090W 1476 nt5.56□□□□□ -1.52
UPF3P48412 PKC1YBL105C 3456 nt5.55□□□□□ -1.52
UPF3P48412 GPA2YER020W 1350 nt5.55□□□□□ -1.52
UPF3P48412 YHR177WYHR177W 1362 nt5.55□□□□□ -1.52
UPF3P48412 YIL067CYIL067C 2037 nt5.55□□□□□ -1.52
UPF3P48412 SNZ3YFL059W 897 nt5.55□□□□□ -1.52
UPF3P48412 YBL029WYBL029W 1131 nt5.55□□□□□ -1.52
UPF3P48412 SNZ2YNL333W 897 nt5.55□□□□□ -1.52
UPF3P48412 CAR1YPL111W 1002 nt5.55□□□□□ -1.52
UPF3P48412 SMF2YHR050W 1650 nt5.55□□□□□ -1.52
UPF3P48412 SMP1YBR182C 1359 nt5.55□□□□□ -1.52
UPF3P48412 IBA57YJR122W 1494 nt5.54□□□□□ -1.52
UPF3P48412 YDL022C-AYDL022C-A 249 nt5.54□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 86 ms