Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFRSF1AP19438 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF1AP19438 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1AP19438 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 AC239859.2-201ENST00000444165 318 ntBASIC19.72■□□□□ 0.75
TNFRSF1AP19438 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TNFRSF1AP19438 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 AC022211.4-201ENST00000625094 2161 ntBASIC19.71■□□□□ 0.75
TNFRSF1AP19438 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1AP19438 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1AP19438 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1AP19438 AC021242.3-201ENST00000607598 1377 ntBASIC19.69■□□□□ 0.74
TNFRSF1AP19438 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 AP003733.4-201ENST00000623785 1697 ntBASIC19.68■□□□□ 0.74
TNFRSF1AP19438 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 MIR4787-201ENST00000607364 84 ntBASIC19.68■□□□□ 0.74
TNFRSF1AP19438 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1AP19438 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.67■□□□□ 0.74
TNFRSF1AP19438 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 AC142381.3-201ENST00000568208 1670 ntBASIC19.67■□□□□ 0.74
TNFRSF1AP19438 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1AP19438 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms