Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDM4BO94953 SMPD5-203ENST00000639008 1464 ntBASIC20.33■□□□□ 0.85
KDM4BO94953 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDM4BO94953 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.33■□□□□ 0.84
KDM4BO94953 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM4BO94953 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM4BO94953 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KDM4BO94953 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDM4BO94953 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
KDM4BO94953 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDM4BO94953 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM4BO94953 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM4BO94953 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KDM4BO94953 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM4BO94953 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDM4BO94953 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
KDM4BO94953 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.31■□□□□ 0.84
KDM4BO94953 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDM4BO94953 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.31■□□□□ 0.84
KDM4BO94953 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDM4BO94953 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDM4BO94953 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
KDM4BO94953 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM4BO94953 ECEL1P2-201ENST00000461596 1295 ntBASIC20.3■□□□□ 0.84
KDM4BO94953 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.3■□□□□ 0.84
KDM4BO94953 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDM4BO94953 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KDM4BO94953 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.29■□□□□ 0.84
KDM4BO94953 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KDM4BO94953 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDM4BO94953 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM4BO94953 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.29■□□□□ 0.84
KDM4BO94953 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDM4BO94953 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM4BO94953 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.29■□□□□ 0.84
KDM4BO94953 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KDM4BO94953 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
KDM4BO94953 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
KDM4BO94953 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.28■□□□□ 0.84
KDM4BO94953 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.28■□□□□ 0.84
KDM4BO94953 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM4BO94953 AC022413.1-201ENST00000624602 984 ntBASIC20.28■□□□□ 0.84
KDM4BO94953 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM4BO94953 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM4BO94953 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDM4BO94953 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.28■□□□□ 0.84
KDM4BO94953 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDM4BO94953 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM4BO94953 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDM4BO94953 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KDM4BO94953 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM4BO94953 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM4BO94953 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KDM4BO94953 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
KDM4BO94953 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.27■□□□□ 0.84
KDM4BO94953 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM4BO94953 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
KDM4BO94953 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.27■□□□□ 0.83
KDM4BO94953 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
KDM4BO94953 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4BO94953 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4BO94953 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4BO94953 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.26■□□□□ 0.83
KDM4BO94953 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KDM4BO94953 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4BO94953 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
KDM4BO94953 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KDM4BO94953 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4BO94953 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4BO94953 AC079834.2-201ENST00000609776 1949 ntBASIC20.25■□□□□ 0.83
KDM4BO94953 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4BO94953 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4BO94953 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4BO94953 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4BO94953 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
KDM4BO94953 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
KDM4BO94953 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4BO94953 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4BO94953 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4BO94953 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KDM4BO94953 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4BO94953 AC141586.4-201ENST00000624558 1573 ntBASIC20.24■□□□□ 0.83
KDM4BO94953 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.24■□□□□ 0.83
KDM4BO94953 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.24■□□□□ 0.83
KDM4BO94953 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KDM4BO94953 AC004812.2-201ENST00000611079 2094 ntBASIC20.23■□□□□ 0.83
KDM4BO94953 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
KDM4BO94953 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM4BO94953 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.23■□□□□ 0.83
KDM4BO94953 RP9P-202ENST00000450133 1212 ntBASIC20.23■□□□□ 0.83
KDM4BO94953 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KDM4BO94953 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.23■□□□□ 0.83
KDM4BO94953 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms