Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.07■□□□□ 0.8
LYRM1O43325 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
LYRM1O43325 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYRM1O43325 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.07■□□□□ 0.8
LYRM1O43325 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYRM1O43325 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.07■□□□□ 0.8
LYRM1O43325 AC127496.7-201ENST00000625110 1798 ntBASIC20.07■□□□□ 0.8
LYRM1O43325 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
LYRM1O43325 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.07■□□□□ 0.8
LYRM1O43325 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYRM1O43325 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.06■□□□□ 0.8
LYRM1O43325 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.06■□□□□ 0.8
LYRM1O43325 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYRM1O43325 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
LYRM1O43325 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYRM1O43325 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYRM1O43325 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYRM1O43325 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYRM1O43325 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.05■□□□□ 0.8
LYRM1O43325 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYRM1O43325 RARRES2P7-201ENST00000567349 469 ntBASIC20.05■□□□□ 0.8
LYRM1O43325 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYRM1O43325 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LYRM1O43325 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
LYRM1O43325 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
LYRM1O43325 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYRM1O43325 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
LYRM1O43325 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYRM1O43325 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYRM1O43325 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.04■□□□□ 0.8
LYRM1O43325 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LYRM1O43325 CAHM-201ENST00000604200 896 ntBASIC20.04■□□□□ 0.8
LYRM1O43325 MIR6090-201ENST00000622481 60 ntBASIC20.04■□□□□ 0.8
LYRM1O43325 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.04■□□□□ 0.8
LYRM1O43325 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LYRM1O43325 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYRM1O43325 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.03■□□□□ 0.8
LYRM1O43325 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYRM1O43325 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LYRM1O43325 MIR762-201ENST00000390236 83 ntBASIC20.03■□□□□ 0.8
LYRM1O43325 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LYRM1O43325 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYRM1O43325 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
LYRM1O43325 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.03■□□□□ 0.8
LYRM1O43325 PKD1P6-201ENST00000343738 4769 ntBASIC20.03■□□□□ 0.8
LYRM1O43325 AC007375.3-201ENST00000600936 2314 ntBASIC20.03■□□□□ 0.8
LYRM1O43325 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LYRM1O43325 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LYRM1O43325 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.02■□□□□ 0.8
LYRM1O43325 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYRM1O43325 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LYRM1O43325 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYRM1O43325 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.02■□□□□ 0.8
LYRM1O43325 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.02■□□□□ 0.8
LYRM1O43325 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYRM1O43325 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LYRM1O43325 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYRM1O43325 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LYRM1O43325 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LYRM1O43325 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LYRM1O43325 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYRM1O43325 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.01■□□□□ 0.79
LYRM1O43325 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYRM1O43325 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20■□□□□ 0.79
LYRM1O43325 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LYRM1O43325 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20■□□□□ 0.79
LYRM1O43325 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20■□□□□ 0.79
LYRM1O43325 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20■□□□□ 0.79
LYRM1O43325 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYRM1O43325 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.99■□□□□ 0.79
LYRM1O43325 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYRM1O43325 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.98■□□□□ 0.79
LYRM1O43325 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYRM1O43325 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LYRM1O43325 GUSBP5-202ENST00000510805 1989 ntBASIC19.98■□□□□ 0.79
LYRM1O43325 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYRM1O43325 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LYRM1O43325 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LYRM1O43325 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYRM1O43325 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.98■□□□□ 0.79
LYRM1O43325 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYRM1O43325 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms