Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
ATP2A1O14983 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ATP2A1O14983 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ATP2A1O14983 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ATP2A1O14983 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ATP2A1O14983 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.92■■□□□ 1.9
ATP2A1O14983 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ATP2A1O14983 MIR6722-201ENST00000617286 78 ntBASIC26.92■■□□□ 1.9
ATP2A1O14983 AC092803.2-201ENST00000564287 1899 ntBASIC26.91■■□□□ 1.9
ATP2A1O14983 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
ATP2A1O14983 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.91■■□□□ 1.9
ATP2A1O14983 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ATP2A1O14983 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ATP2A1O14983 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
ATP2A1O14983 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.91■■□□□ 1.9
ATP2A1O14983 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.91■■□□□ 1.9
ATP2A1O14983 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
ATP2A1O14983 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
ATP2A1O14983 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
ATP2A1O14983 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.9■■□□□ 1.9
ATP2A1O14983 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.9■■□□□ 1.9
ATP2A1O14983 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
ATP2A1O14983 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ATP2A1O14983 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ATP2A1O14983 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ATP2A1O14983 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ATP2A1O14983 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ATP2A1O14983 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ATP2A1O14983 AL136116.3-201ENST00000402907 1138 ntBASIC26.89■■□□□ 1.9
ATP2A1O14983 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ATP2A1O14983 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.89■■□□□ 1.9
ATP2A1O14983 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.89■■□□□ 1.9
ATP2A1O14983 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATP2A1O14983 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
ATP2A1O14983 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
ATP2A1O14983 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.88■■□□□ 1.89
ATP2A1O14983 AL512631.2-201ENST00000604634 923 ntBASIC26.88■■□□□ 1.89
ATP2A1O14983 MIR4466-201ENST00000606121 54 ntBASIC26.88■■□□□ 1.89
ATP2A1O14983 AL139246.5-201ENST00000606645 996 ntBASIC26.88■■□□□ 1.89
ATP2A1O14983 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ATP2A1O14983 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.87■■□□□ 1.89
ATP2A1O14983 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.87■■□□□ 1.89
ATP2A1O14983 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ATP2A1O14983 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
ATP2A1O14983 MIR638-201ENST00000385237 100 ntBASIC26.87■■□□□ 1.89
ATP2A1O14983 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.87■■□□□ 1.89
ATP2A1O14983 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ATP2A1O14983 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.87■■□□□ 1.89
ATP2A1O14983 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.87■■□□□ 1.89
ATP2A1O14983 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.87■■□□□ 1.89
ATP2A1O14983 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ATP2A1O14983 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.87■■□□□ 1.89
ATP2A1O14983 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.86■■□□□ 1.89
ATP2A1O14983 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ATP2A1O14983 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.86■■□□□ 1.89
ATP2A1O14983 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.86■■□□□ 1.89
ATP2A1O14983 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
ATP2A1O14983 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATP2A1O14983 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
ATP2A1O14983 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
ATP2A1O14983 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ATP2A1O14983 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP2A1O14983 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP2A1O14983 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
ATP2A1O14983 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.84■■□□□ 1.89
ATP2A1O14983 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ATP2A1O14983 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.84■■□□□ 1.89
ATP2A1O14983 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
ATP2A1O14983 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
ATP2A1O14983 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.83■■□□□ 1.89
ATP2A1O14983 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
ATP2A1O14983 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
ATP2A1O14983 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ATP2A1O14983 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP2A1O14983 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP2A1O14983 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP2A1O14983 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.82■■□□□ 1.88
ATP2A1O14983 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP2A1O14983 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP2A1O14983 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.82■■□□□ 1.88
ATP2A1O14983 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
ATP2A1O14983 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP2A1O14983 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ATP2A1O14983 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.81■■□□□ 1.88
ATP2A1O14983 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ATP2A1O14983 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ATP2A1O14983 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.8■■□□□ 1.88
ATP2A1O14983 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP2A1O14983 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP2A1O14983 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP2A1O14983 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.8■■□□□ 1.88
ATP2A1O14983 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ATP2A1O14983 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ATP2A1O14983 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP2A1O14983 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ATP2A1O14983 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ATP2A1O14983 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.79■■□□□ 1.88
ATP2A1O14983 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP2A1O14983 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ATP2A1O14983 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms