Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDX4O14627 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.87■■□□□ 1.25
CDX4O14627 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.87■■□□□ 1.25
CDX4O14627 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.87■■□□□ 1.25
CDX4O14627 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.87■■□□□ 1.25
CDX4O14627 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CDX4O14627 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDX4O14627 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDX4O14627 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDX4O14627 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.86■■□□□ 1.25
CDX4O14627 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.86■■□□□ 1.25
CDX4O14627 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.86■■□□□ 1.25
CDX4O14627 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDX4O14627 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
CDX4O14627 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.85■■□□□ 1.25
CDX4O14627 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDX4O14627 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDX4O14627 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.85■■□□□ 1.25
CDX4O14627 MIR4767-201ENST00000582827 78 ntBASIC22.85■■□□□ 1.25
CDX4O14627 CA15P2-201ENST00000611168 834 ntBASIC22.85■■□□□ 1.25
CDX4O14627 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CDX4O14627 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDX4O14627 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.84■■□□□ 1.25
CDX4O14627 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDX4O14627 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.84■■□□□ 1.25
CDX4O14627 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.84■■□□□ 1.25
CDX4O14627 RASA4CP-201ENST00000424092 1398 ntBASIC22.84■■□□□ 1.25
CDX4O14627 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDX4O14627 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDX4O14627 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.83■■□□□ 1.25
CDX4O14627 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDX4O14627 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
CDX4O14627 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDX4O14627 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.83■■□□□ 1.25
CDX4O14627 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.83■■□□□ 1.25
CDX4O14627 SYT6-210ENST00000641643 1587 ntBASIC22.83■■□□□ 1.25
CDX4O14627 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDX4O14627 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CDX4O14627 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDX4O14627 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CDX4O14627 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDX4O14627 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CDX4O14627 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDX4O14627 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDX4O14627 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDX4O14627 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDX4O14627 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDX4O14627 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDX4O14627 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.8■■□□□ 1.24
CDX4O14627 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
CDX4O14627 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDX4O14627 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.8■■□□□ 1.24
CDX4O14627 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDX4O14627 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDX4O14627 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CDX4O14627 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDX4O14627 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.79■■□□□ 1.24
CDX4O14627 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.79■■□□□ 1.24
CDX4O14627 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDX4O14627 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDX4O14627 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDX4O14627 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDX4O14627 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDX4O14627 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDX4O14627 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
CDX4O14627 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.78■■□□□ 1.24
CDX4O14627 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDX4O14627 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDX4O14627 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDX4O14627 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDX4O14627 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.77■■□□□ 1.24
CDX4O14627 AC092171.4-201ENST00000609130 632 ntBASIC22.77■■□□□ 1.24
CDX4O14627 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.77■■□□□ 1.24
CDX4O14627 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDX4O14627 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDX4O14627 IRS3P-201ENST00000223076 1006 ntBASIC22.76■■□□□ 1.23
CDX4O14627 SERBP1P1-201ENST00000396021 1160 ntBASIC22.76■■□□□ 1.23
CDX4O14627 AC027682.1-201ENST00000562846 899 ntBASIC22.76■■□□□ 1.23
CDX4O14627 RARRES2P11-201ENST00000635158 484 ntBASIC22.76■■□□□ 1.23
CDX4O14627 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDX4O14627 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.76■■□□□ 1.23
CDX4O14627 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDX4O14627 AC139426.1-201ENST00000568218 2529 ntBASIC22.75■■□□□ 1.23
CDX4O14627 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.75■■□□□ 1.23
CDX4O14627 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.75■■□□□ 1.23
CDX4O14627 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.75■■□□□ 1.23
CDX4O14627 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDX4O14627 AC090192.1-201ENST00000517740 490 ntBASIC22.75■■□□□ 1.23
CDX4O14627 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDX4O14627 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.74■■□□□ 1.23
CDX4O14627 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.74■■□□□ 1.23
CDX4O14627 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDX4O14627 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDX4O14627 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDX4O14627 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.74■■□□□ 1.23
CDX4O14627 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.74■■□□□ 1.23
CDX4O14627 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDX4O14627 AC005703.6-201ENST00000623265 1329 ntBASIC22.74■■□□□ 1.23
CDX4O14627 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.74■■□□□ 1.23
CDX4O14627 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms