Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTCAO00442 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCAO00442 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCAO00442 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RTCAO00442 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.28■■□□□ 1.16
RTCAO00442 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCAO00442 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.28■■□□□ 1.16
RTCAO00442 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.28■■□□□ 1.16
RTCAO00442 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTCAO00442 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.27■■□□□ 1.16
RTCAO00442 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.27■■□□□ 1.16
RTCAO00442 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCAO00442 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTCAO00442 AC019171.1-201ENST00000601251 1056 ntBASIC22.27■■□□□ 1.16
RTCAO00442 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTCAO00442 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.26■■□□□ 1.15
RTCAO00442 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTCAO00442 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCAO00442 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RTCAO00442 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RTCAO00442 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCAO00442 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.26■■□□□ 1.15
RTCAO00442 AC074183.2-201ENST00000623112 922 ntBASIC22.26■■□□□ 1.15
RTCAO00442 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RTCAO00442 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTCAO00442 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTCAO00442 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.25■■□□□ 1.15
RTCAO00442 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.25■■□□□ 1.15
RTCAO00442 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCAO00442 LINC01124-201ENST00000409786 2117 ntBASIC22.25■■□□□ 1.15
RTCAO00442 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTCAO00442 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.25■■□□□ 1.15
RTCAO00442 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.25■■□□□ 1.15
RTCAO00442 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTCAO00442 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCAO00442 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTCAO00442 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.24■■□□□ 1.15
RTCAO00442 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCAO00442 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTCAO00442 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCAO00442 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTCAO00442 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCAO00442 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCAO00442 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.23■■□□□ 1.15
RTCAO00442 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCAO00442 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTCAO00442 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTCAO00442 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 AC093323.1-202ENST00000635031 2045 ntBASIC22.23■■□□□ 1.15
RTCAO00442 AC090877.2-201ENST00000558441 1738 ntBASIC22.23■■□□□ 1.15
RTCAO00442 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.23■■□□□ 1.15
RTCAO00442 HLA-L-211ENST00000482052 1765 ntBASIC22.22■■□□□ 1.15
RTCAO00442 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTCAO00442 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCAO00442 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCAO00442 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RTCAO00442 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.22■■□□□ 1.15
RTCAO00442 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTCAO00442 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.22■■□□□ 1.15
RTCAO00442 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTCAO00442 KRT8P33-201ENST00000508125 1423 ntBASIC22.22■■□□□ 1.15
RTCAO00442 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.21■■□□□ 1.15
RTCAO00442 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCAO00442 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTCAO00442 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.21■■□□□ 1.15
RTCAO00442 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RTCAO00442 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCAO00442 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTCAO00442 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RTCAO00442 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.2■■□□□ 1.14
RTCAO00442 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTCAO00442 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
RTCAO00442 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTCAO00442 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTCAO00442 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTCAO00442 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
RTCAO00442 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTCAO00442 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.19■■□□□ 1.14
RTCAO00442 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.19■■□□□ 1.14
RTCAO00442 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTCAO00442 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTCAO00442 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
RTCAO00442 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTCAO00442 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.18■■□□□ 1.14
RTCAO00442 AC103834.1-201ENST00000520383 144 ntBASIC22.18■■□□□ 1.14
RTCAO00442 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTCAO00442 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTCAO00442 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RTCAO00442 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCAO00442 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTCAO00442 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCAO00442 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.17■■□□□ 1.14
RTCAO00442 AC022616.5-201ENST00000518796 181 ntBASIC22.17■■□□□ 1.14
RTCAO00442 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTCAO00442 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms