Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.25■□□□□ 0.99
NPIPA3F8WFD2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.25■□□□□ 0.99
NPIPA3F8WFD2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPIPA3F8WFD2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPIPA3F8WFD2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPA3F8WFD2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 AC092028.1-203ENST00000608262 953 ntBASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 AC011551.1-201ENST00000614101 683 ntBASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPA3F8WFD2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 FOXO3B-201ENST00000395675 1928 ntBASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPA3F8WFD2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 AC008406.3-201ENST00000620001 1374 ntBASIC21.21■□□□□ 0.99
NPIPA3F8WFD2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPA3F8WFD2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPA3F8WFD2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPA3F8WFD2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
NPIPA3F8WFD2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPA3F8WFD2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.17■□□□□ 0.98
NPIPA3F8WFD2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPA3F8WFD2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPA3F8WFD2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPA3F8WFD2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPA3F8WFD2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPA3F8WFD2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPA3F8WFD2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.15■□□□□ 0.98
NPIPA3F8WFD2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.15■□□□□ 0.98
NPIPA3F8WFD2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPA3F8WFD2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NPIPA3F8WFD2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.14■□□□□ 0.98
NPIPA3F8WFD2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.14■□□□□ 0.97
NPIPA3F8WFD2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.14■□□□□ 0.97
NPIPA3F8WFD2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPIPA3F8WFD2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPIPA3F8WFD2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPIPA3F8WFD2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPIPA3F8WFD2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NPIPA3F8WFD2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPA3F8WFD2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPA3F8WFD2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.13■□□□□ 0.97
NPIPA3F8WFD2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPA3F8WFD2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms