Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01548A6NM66 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LINC01548A6NM66 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01548A6NM66 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LINC01548A6NM66 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01548A6NM66 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.48■□□□□ 0.55
LINC01548A6NM66 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01548A6NM66 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LINC01548A6NM66 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01548A6NM66 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01548A6NM66 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01548A6NM66 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
LINC01548A6NM66 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01548A6NM66 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LINC01548A6NM66 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01548A6NM66 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.47■□□□□ 0.55
LINC01548A6NM66 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC01548A6NM66 MIR4281-201ENST00000580852 62 ntBASIC18.47■□□□□ 0.55
LINC01548A6NM66 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LINC01548A6NM66 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01548A6NM66 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01548A6NM66 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01548A6NM66 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01548A6NM66 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01548A6NM66 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01548A6NM66 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LINC01548A6NM66 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC01548A6NM66 AC011551.1-201ENST00000614101 683 ntBASIC18.46■□□□□ 0.55
LINC01548A6NM66 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC01548A6NM66 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC01548A6NM66 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LINC01548A6NM66 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01548A6NM66 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.45■□□□□ 0.54
LINC01548A6NM66 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01548A6NM66 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01548A6NM66 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01548A6NM66 AC138932.3-201ENST00000567634 1902 ntBASIC18.45■□□□□ 0.54
LINC01548A6NM66 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.45■□□□□ 0.54
LINC01548A6NM66 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
LINC01548A6NM66 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01548A6NM66 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01548A6NM66 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC01548A6NM66 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01548A6NM66 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01548A6NM66 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01548A6NM66 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01548A6NM66 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.44■□□□□ 0.54
LINC01548A6NM66 AC239859.2-201ENST00000444165 318 ntBASIC18.44■□□□□ 0.54
LINC01548A6NM66 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01548A6NM66 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
LINC01548A6NM66 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01548A6NM66 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01548A6NM66 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LINC01548A6NM66 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
LINC01548A6NM66 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01548A6NM66 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01548A6NM66 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01548A6NM66 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LINC01548A6NM66 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01548A6NM66 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01548A6NM66 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01548A6NM66 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01548A6NM66 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01548A6NM66 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01548A6NM66 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LINC01548A6NM66 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LINC01548A6NM66 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01548A6NM66 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LINC01548A6NM66 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01548A6NM66 MIR6089-201ENST00000616698 64 ntBASIC18.41■□□□□ 0.54
LINC01548A6NM66 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LINC01548A6NM66 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01548A6NM66 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01548A6NM66 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01548A6NM66 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01548A6NM66 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01548A6NM66 AC137630.3-201ENST00000607245 391 ntBASIC18.4■□□□□ 0.54
LINC01548A6NM66 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01548A6NM66 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01548A6NM66 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01548A6NM66 AF131216.4-201ENST00000638924 1588 ntBASIC18.39■□□□□ 0.53
LINC01548A6NM66 AC142381.3-201ENST00000568208 1670 ntBASIC18.39■□□□□ 0.53
LINC01548A6NM66 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LINC01548A6NM66 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LINC01548A6NM66 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.39■□□□□ 0.53
LINC01548A6NM66 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01548A6NM66 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC01548A6NM66 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC01548A6NM66 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01548A6NM66 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01548A6NM66 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC01548A6NM66 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01548A6NM66 BX664725.1-201ENST00000438252 379 ntBASIC18.38■□□□□ 0.53
LINC01548A6NM66 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.38■□□□□ 0.53
LINC01548A6NM66 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01548A6NM66 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01548A6NM66 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LINC01548A6NM66 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01548A6NM66 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01548A6NM66 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms