Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RTL1A6NKG5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RTL1A6NKG5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RTL1A6NKG5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
RTL1A6NKG5 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.41■■■□□ 2.62
RTL1A6NKG5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
RTL1A6NKG5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RTL1A6NKG5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.4■■■□□ 2.62
RTL1A6NKG5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RTL1A6NKG5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.4■■■□□ 2.62
RTL1A6NKG5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
RTL1A6NKG5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RTL1A6NKG5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.4■■■□□ 2.62
RTL1A6NKG5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RTL1A6NKG5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.39■■■□□ 2.62
RTL1A6NKG5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.39■■■□□ 2.62
RTL1A6NKG5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RTL1A6NKG5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RTL1A6NKG5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.38■■■□□ 2.61
RTL1A6NKG5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.38■■■□□ 2.61
RTL1A6NKG5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
RTL1A6NKG5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
RTL1A6NKG5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RTL1A6NKG5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.37■■■□□ 2.61
RTL1A6NKG5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RTL1A6NKG5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RTL1A6NKG5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RTL1A6NKG5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.37■■■□□ 2.61
RTL1A6NKG5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.37■■■□□ 2.61
RTL1A6NKG5 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.36■■■□□ 2.61
RTL1A6NKG5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.36■■■□□ 2.61
RTL1A6NKG5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RTL1A6NKG5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RTL1A6NKG5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.36■■■□□ 2.61
RTL1A6NKG5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RTL1A6NKG5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL1A6NKG5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.34■■■□□ 2.61
RTL1A6NKG5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL1A6NKG5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.34■■■□□ 2.61
RTL1A6NKG5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.34■■■□□ 2.61
RTL1A6NKG5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL1A6NKG5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
RTL1A6NKG5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
RTL1A6NKG5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL1A6NKG5 AC096631.2-201ENST00000436136 790 ntBASIC31.33■■■□□ 2.61
RTL1A6NKG5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
RTL1A6NKG5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.33■■■□□ 2.61
RTL1A6NKG5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RTL1A6NKG5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
RTL1A6NKG5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
RTL1A6NKG5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RTL1A6NKG5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.32■■■□□ 2.61
RTL1A6NKG5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
RTL1A6NKG5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.32■■■□□ 2.6
RTL1A6NKG5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RTL1A6NKG5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RTL1A6NKG5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RTL1A6NKG5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RTL1A6NKG5 MIR935-201ENST00000401179 91 ntBASIC31.3■■■□□ 2.6
RTL1A6NKG5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.3■■■□□ 2.6
RTL1A6NKG5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RTL1A6NKG5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.3■■■□□ 2.6
RTL1A6NKG5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RTL1A6NKG5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.3■■■□□ 2.6
RTL1A6NKG5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RTL1A6NKG5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
RTL1A6NKG5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.3■■■□□ 2.6
RTL1A6NKG5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RTL1A6NKG5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RTL1A6NKG5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.29■■■□□ 2.6
RTL1A6NKG5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.29■■■□□ 2.6
RTL1A6NKG5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.28■■■□□ 2.6
RTL1A6NKG5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RTL1A6NKG5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RTL1A6NKG5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
RTL1A6NKG5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RTL1A6NKG5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RTL1A6NKG5 AC133561.4-201ENST00000566112 224 ntBASIC31.28■■■□□ 2.6
RTL1A6NKG5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RTL1A6NKG5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RTL1A6NKG5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
RTL1A6NKG5 AC092803.2-201ENST00000564287 1899 ntBASIC31.27■■■□□ 2.6
RTL1A6NKG5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.26■■■□□ 2.6
RTL1A6NKG5 AL121749.1-202ENST00000609313 2153 ntBASIC31.26■■■□□ 2.59
RTL1A6NKG5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RTL1A6NKG5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
RTL1A6NKG5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RTL1A6NKG5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.25■■■□□ 2.59
RTL1A6NKG5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.25■■■□□ 2.59
RTL1A6NKG5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
RTL1A6NKG5 AC004448.1-201ENST00000458332 883 ntBASIC31.25■■■□□ 2.59
RTL1A6NKG5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.25■■■□□ 2.59
RTL1A6NKG5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
RTL1A6NKG5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
RTL1A6NKG5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RTL1A6NKG5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
RTL1A6NKG5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RTL1A6NKG5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.24■■■□□ 2.59
RTL1A6NKG5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.24■■■□□ 2.59
RTL1A6NKG5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms