Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SMIM35A0A1B0GVV1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMIM35A0A1B0GVV1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.77■■□□□ 1.72
SMIM35A0A1B0GVV1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMIM35A0A1B0GVV1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMIM35A0A1B0GVV1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.77■■□□□ 1.72
SMIM35A0A1B0GVV1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
SMIM35A0A1B0GVV1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
SMIM35A0A1B0GVV1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.76■■□□□ 1.71
SMIM35A0A1B0GVV1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.76■■□□□ 1.71
SMIM35A0A1B0GVV1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.76■■□□□ 1.71
SMIM35A0A1B0GVV1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
SMIM35A0A1B0GVV1 MIR6722-201ENST00000617286 78 ntBASIC25.76■■□□□ 1.71
SMIM35A0A1B0GVV1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.76■■□□□ 1.71
SMIM35A0A1B0GVV1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMIM35A0A1B0GVV1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
SMIM35A0A1B0GVV1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMIM35A0A1B0GVV1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMIM35A0A1B0GVV1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMIM35A0A1B0GVV1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMIM35A0A1B0GVV1 DUSP8P4-201ENST00000399538 1761 ntBASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMIM35A0A1B0GVV1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 AL136116.3-201ENST00000402907 1138 ntBASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMIM35A0A1B0GVV1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMIM35A0A1B0GVV1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SMIM35A0A1B0GVV1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMIM35A0A1B0GVV1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.71■■□□□ 1.71
SMIM35A0A1B0GVV1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.71■■□□□ 1.71
SMIM35A0A1B0GVV1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SMIM35A0A1B0GVV1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SMIM35A0A1B0GVV1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SMIM35A0A1B0GVV1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMIM35A0A1B0GVV1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.7■■□□□ 1.7
SMIM35A0A1B0GVV1 AL512631.2-201ENST00000604634 923 ntBASIC25.7■■□□□ 1.7
SMIM35A0A1B0GVV1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SMIM35A0A1B0GVV1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 MIR4466-201ENST00000606121 54 ntBASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMIM35A0A1B0GVV1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SMIM35A0A1B0GVV1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 SLC6A10P-202ENST00000431994 2058 ntBASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMIM35A0A1B0GVV1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms