Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 AC025884.2-201ENST00000553429 711 ntBASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-1A0A0K0K1D8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-1A0A0K0K1D8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CLDN5-201ENST00000403084 2357 ntBASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-1A0A0K0K1D8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-1A0A0K0K1D8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 C9orf163-202ENST00000624034 2573 ntBASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-1A0A0K0K1D8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 AL157400.5-201ENST00000507624 621 ntBASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms