Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 DUX4L11-201ENST00000611504 1267 ntBASIC20■□□□□ 0.79
TRAV18A0A075B6X5 DUX4L12-201ENST00000614593 1267 ntBASIC20■□□□□ 0.79
TRAV18A0A075B6X5 DUX4L14-201ENST00000621227 1267 ntBASIC20■□□□□ 0.79
TRAV18A0A075B6X5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV18A0A075B6X5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV18A0A075B6X5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV18A0A075B6X5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRAV18A0A075B6X5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV18A0A075B6X5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAV18A0A075B6X5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV18A0A075B6X5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV18A0A075B6X5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV18A0A075B6X5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV18A0A075B6X5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TRAV18A0A075B6X5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV18A0A075B6X5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV18A0A075B6X5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV18A0A075B6X5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 HLA-L-211ENST00000482052 1765 ntBASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV18A0A075B6X5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV18A0A075B6X5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 CLDN5-201ENST00000403084 2357 ntBASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAV18A0A075B6X5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAV18A0A075B6X5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms