Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-1A0A075B6T8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-1A0A075B6T8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-1A0A075B6T8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.53■□□□□ 0.4
TRAV9-1A0A075B6T8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-1A0A075B6T8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-1A0A075B6T8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV9-1A0A075B6T8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-1A0A075B6T8 MIR6089-201ENST00000616698 64 ntBASIC17.52■□□□□ 0.4
TRAV9-1A0A075B6T8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-1A0A075B6T8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV9-1A0A075B6T8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 AC007375.3-201ENST00000600936 2314 ntBASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 AC110285.7-201ENST00000624417 1536 ntBASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-1A0A075B6T8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 SLC25A24-204ENST00000569674 2357 ntBASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV9-1A0A075B6T8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 AP002365.1-201ENST00000603448 772 ntBASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-1A0A075B6T8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms