Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 MIR5189-201ENST00000577370 114 ntBASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 AL022328.1-201ENST00000610050 478 ntBASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1G3Q9Y6M4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 INTS4P2-202ENST00000614726 2019 ntBASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 TDH-203ENST00000531764 1110 ntBASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 MIR4259-201ENST00000584466 101 ntBASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1G3Q9Y6M4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 AC134407.2-201ENST00000625089 1978 ntBASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 KRT18P64-201ENST00000434946 1219 ntBASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 CROCCP4-201ENST00000457096 498 ntBASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 PTP4A1P2-201ENST00000546033 454 ntBASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 AC124283.3-201ENST00000570869 594 ntBASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 AC000095.1-201ENST00000603208 874 ntBASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms