Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AP006294.1-201ENST00000415407 339 ntBASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AL080243.2-201ENST00000418783 582 ntBASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 RN7SL752P-201ENST00000463779 287 ntBASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AC018892.3-201ENST00000623986 2499 ntBASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB1Q9Y5F3 AL162727.3-201ENST00000635661 2787 ntBASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 AL079307.3-201ENST00000556114 283 ntBASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 MIR4313-201ENST00000580760 101 ntBASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 AC008494.3-201ENST00000606615 944 ntBASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 AC017083.2-201ENST00000608069 979 ntBASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 KRT8P12-202ENST00000472924 1397 ntBASIC15.75■□□□□ 0.11
PCDHB1Q9Y5F3 CICP6-201ENST00000457191 2729 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 AC020658.6-201ENST00000623564 1870 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 SPDYE19P-201ENST00000338590 713 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 AL512384.1-201ENST00000406683 331 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms