Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP4S1Q9Y587 AC018892.3-201ENST00000623986 2499 ntBASIC14.97□□□□□ -0.01
AP4S1Q9Y587 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 MIR4515-201ENST00000584082 81 ntBASIC14.96□□□□□ -0.01
AP4S1Q9Y587 AL031055.1-201ENST00000606362 631 ntBASIC14.96□□□□□ -0.01
AP4S1Q9Y587 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
AP4S1Q9Y587 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.96□□□□□ -0.02
AP4S1Q9Y587 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC015656.1-201ENST00000624209 3578 ntBASIC14.95□□□□□ -0.02
AP4S1Q9Y587 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AC069148.1-201ENST00000608741 768 ntBASIC14.95□□□□□ -0.02
AP4S1Q9Y587 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 INTS4P1-203ENST00000641008 3683 ntBASIC14.95□□□□□ -0.02
AP4S1Q9Y587 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP4S1Q9Y587 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms