Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 FOXO1B-201ENST00000504678 1527 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 AC004987.2-201ENST00000395959 1148 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 AC026396.1-201ENST00000419388 421 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 MCCD1P2-201ENST00000423228 335 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 AC142381.1-201ENST00000426099 345 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 SPDYE11-202ENST00000450699 704 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 RNA5SP410-201ENST00000516285 106 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 KRT8P23-201ENST00000560090 1207 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 SPDYE9P-201ENST00000570642 692 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 AC026120.1-201ENST00000611536 926 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 SPDYE10P-202ENST00000612005 668 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 SPDYE8P-202ENST00000612377 668 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 AC092902.6-201ENST00000641783 218 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 AL109954.1-202ENST00000564051 2148 ntBASIC14.84□□□□□ -0.03
IFT52Q9Y366 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
IFT52Q9Y366 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.84□□□□□ -0.03
IFT52Q9Y366 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
IFT52Q9Y366 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
IFT52Q9Y366 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
IFT52Q9Y366 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.83□□□□□ -0.03
IFT52Q9Y366 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 MIR346-201ENST00000362234 95 ntBASIC14.83□□□□□ -0.04
IFT52Q9Y366 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 AC023274.1-201ENST00000418278 595 ntBASIC14.83□□□□□ -0.04
IFT52Q9Y366 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 IGHV3-62-201ENST00000520057 340 ntBASIC14.83□□□□□ -0.04
IFT52Q9Y366 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 TMBIM7P-203ENST00000641617 1718 ntBASIC14.83□□□□□ -0.04
IFT52Q9Y366 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
IFT52Q9Y366 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IFT52Q9Y366 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 AC079781.5-202ENST00000641784 3743 ntBASIC14.82□□□□□ -0.04
IFT52Q9Y366 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IFT52Q9Y366 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.82□□□□□ -0.04
IFT52Q9Y366 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms