Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 AL390755.1-201ENST00000623716 2027 ntBASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AC091951.1-201ENST00000512854 2465 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 RNU1-129P-201ENST00000384064 167 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 ELK2BP-201ENST00000415014 1224 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 U1.21-201ENST00000580816 167 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AL355877.3-201ENST00000622820 899 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 IER3-202ENST00000376377 1350 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 LINC00528-201ENST00000600723 2160 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 AL359258.3-201ENST00000622910 2331 ntBASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP3Q9Y2W7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 LAGE3P1-201ENST00000425356 484 ntBASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 RN7SL850P-201ENST00000579959 291 ntBASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 AL031055.1-201ENST00000606362 631 ntBASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP3Q9Y2W7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP3Q9Y2W7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms