Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AL365330.1-201ENST00000607459 531 ntBASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AL365203.3-201ENST00000609742 2057 ntBASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
NPIPA1Q9UND3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 INE1-201ENST00000456273 945 ntBASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 TSPY26P-202ENST00000565928 3884 ntBASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 SLC7A15P-201ENST00000424028 1363 ntBASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPIPA1Q9UND3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AC011495.1-201ENST00000498085 584 ntBASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AC055876.2-201ENST00000531834 546 ntBASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 WASH4P-201ENST00000564273 1246 ntBASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 AL359881.2-201ENST00000602973 570 ntBASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms