Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 INTS4P2-202ENST00000614726 2019 ntBASIC16.59■□□□□ 0.25
CDH9Q9ULB4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 AL512384.1-201ENST00000406683 331 ntBASIC16.59■□□□□ 0.25
CDH9Q9ULB4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.59■□□□□ 0.25
CDH9Q9ULB4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CDH9Q9ULB4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH9Q9ULB4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH9Q9ULB4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH9Q9ULB4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH9Q9ULB4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.58■□□□□ 0.25
CDH9Q9ULB4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 VDAC1P7-201ENST00000462417 847 ntBASIC16.58■□□□□ 0.24
CDH9Q9ULB4 RN7SL837P-201ENST00000463010 287 ntBASIC16.58■□□□□ 0.24
CDH9Q9ULB4 AL359711.2-201ENST00000563105 872 ntBASIC16.58■□□□□ 0.24
CDH9Q9ULB4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 IGHV3-72-202ENST00000621503 303 ntBASIC16.58■□□□□ 0.24
CDH9Q9ULB4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 AC127383.1-201ENST00000444697 1800 ntBASIC16.58■□□□□ 0.24
CDH9Q9ULB4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CDH9Q9ULB4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.57■□□□□ 0.24
CDH9Q9ULB4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AL162726.2-201ENST00000438986 1017 ntBASIC16.57■□□□□ 0.24
CDH9Q9ULB4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AC120045.2-201ENST00000567334 178 ntBASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AC132938.2-201ENST00000579188 680 ntBASIC16.57■□□□□ 0.24
CDH9Q9ULB4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 AL591163.1-201ENST00000641757 987 ntBASIC16.57■□□□□ 0.24
CDH9Q9ULB4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH9Q9ULB4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH9Q9ULB4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH9Q9ULB4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH9Q9ULB4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH9Q9ULB4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH9Q9ULB4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH9Q9ULB4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms