Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MIR4313-201ENST00000580760 101 ntBASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 AC097359.3-201ENST00000603982 1210 ntBASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 TMEM261P1-201ENST00000604899 340 ntBASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MIR6805-201ENST00000615055 62 ntBASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
FOXD3Q9UJU5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.08□□□□□ -0.15
FOXD3Q9UJU5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC136604.1-201ENST00000418535 575 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC007389.4-201ENST00000454674 793 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 SPDYE18-201ENST00000510091 1050 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC023310.3-201ENST00000557027 670 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 RAB43P1-201ENST00000561790 589 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC100756.1-201ENST00000562736 682 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 RARRES2P5-201ENST00000564013 466 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC138749.3-201ENST00000567691 622 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC025048.3-201ENST00000590609 569 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC116165.1-201ENST00000611806 668 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 AC005702.4-201ENST00000618393 416 ntBASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms