Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 AL691432.1-201ENST00000596308 1422 ntBASIC16.08■□□□□ 0.16
EBF1Q9UH73 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 AC004987.2-201ENST00000395959 1148 ntBASIC16.07■□□□□ 0.16
EBF1Q9UH73 KLF2P4-201ENST00000451959 1225 ntBASIC16.07■□□□□ 0.16
EBF1Q9UH73 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 AL022328.1-201ENST00000610050 478 ntBASIC16.07■□□□□ 0.16
EBF1Q9UH73 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 HLA-A-202ENST00000376806 1854 ntBASIC16.07■□□□□ 0.16
EBF1Q9UH73 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
EBF1Q9UH73 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
EBF1Q9UH73 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 PDIA3P1-201ENST00000471856 1510 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 AL133338.1-201ENST00000565695 1517 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 TUBB1P2-201ENST00000422712 1306 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 TUBB1P1-201ENST00000503144 1300 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 RPL13P2-201ENST00000440687 659 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 EEF1DP4-201ENST00000446006 880 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 MIR4538-201ENST00000581377 78 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 AL158212.4-201ENST00000624062 1286 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.06■□□□□ 0.16
EBF1Q9UH73 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms