Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 AL512384.1-201ENST00000406683 331 ntBASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 AC132872.4-202ENST00000622924 2756 ntBASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMG20BQ9P0W2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 U91328.1-201ENST00000437528 223 ntBASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 GIMAP3P-201ENST00000495150 836 ntBASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 BRI3BPP1-201ENST00000594224 787 ntBASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMG20BQ9P0W2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AL121723.1-201ENST00000445194 1519 ntBASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 RPSAP52-203ENST00000622976 1023 ntBASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.1■□□□□ 0.65
HMG20BQ9P0W2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMG20BQ9P0W2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms