Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 LINC02012-201ENST00000608206 1725 ntBASIC14.3□□□□□ -0.12
CHD8Q9HCK8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AC078875.1-201ENST00000431907 724 ntBASIC14.3□□□□□ -0.12
CHD8Q9HCK8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.3□□□□□ -0.12
CHD8Q9HCK8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC093909.3-201ENST00000504783 336 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC018846.1-201ENST00000568231 183 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC055811.3-201ENST00000584952 686 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC012073.1-201ENST00000606114 1108 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 LRRC59-203ENST00000576448 1531 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 RN7SL258P-201ENST00000478664 300 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 LINC00634-202ENST00000505157 222 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 SNORD3B-2-202ENST00000571722 791 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 Z69890.1-201ENST00000382990 339 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AL157813.1-201ENST00000612996 587 ntBASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
CHD8Q9HCK8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 LINC01815-202ENST00000641468 1409 ntBASIC14.28□□□□□ -0.12
CHD8Q9HCK8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AC136759.1-202ENST00000530858 2194 ntBASIC14.28□□□□□ -0.12
CHD8Q9HCK8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms