Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AL513523.2-202ENST00000427283 2040 ntBASIC16.91■□□□□ 0.3
NXF3Q9H4D5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 BCRP2-202ENST00000447763 634 ntBASIC16.91■□□□□ 0.3
NXF3Q9H4D5 BCRP6-201ENST00000510112 632 ntBASIC16.91■□□□□ 0.3
NXF3Q9H4D5 BCRP7-201ENST00000511549 544 ntBASIC16.91■□□□□ 0.3
NXF3Q9H4D5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MIR6775-201ENST00000617557 69 ntBASIC16.91■□□□□ 0.3
NXF3Q9H4D5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 AC092127.1-201ENST00000567093 3455 ntBASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 KRT43P-201ENST00000434019 910 ntBASIC16.9■□□□□ 0.3
NXF3Q9H4D5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 AP001889.1-201ENST00000525414 633 ntBASIC16.9■□□□□ 0.3
NXF3Q9H4D5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 PTP4A1P2-201ENST00000546033 454 ntBASIC16.9■□□□□ 0.3
NXF3Q9H4D5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NXF3Q9H4D5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NXF3Q9H4D5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.89■□□□□ 0.3
NXF3Q9H4D5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
NXF3Q9H4D5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NXF3Q9H4D5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NXF3Q9H4D5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms