Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 HLA-H-201ENST00000383620 1096 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 KRT18P3-201ENST00000451602 1288 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AL139010.1-201ENST00000454878 894 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 AC090616.6-203ENST00000579186 1945 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 CICP24-201ENST00000605464 2705 ntBASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J2Q9GZM3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 MIR346-201ENST00000362234 95 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 AL590627.1-203ENST00000421194 1026 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 AL645939.2-201ENST00000427340 991 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 RNA5SP410-201ENST00000516285 106 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 AC106730.1-201ENST00000566722 1090 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 AC091812.2-201ENST00000619081 385 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CICP13-201ENST00000422015 2789 ntBASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J2Q9GZM3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J2Q9GZM3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J2Q9GZM3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J2Q9GZM3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms