Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 AC093433.1-201ENST00000458048 571 ntBASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 AC106760.1-201ENST00000508690 800 ntBASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 PTP4A1P2-201ENST00000546033 454 ntBASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 LINC02447-202ENST00000501888 2146 ntBASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC85AQ96PX6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 KLF2P4-201ENST00000451959 1225 ntBASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 RPL13AP25-201ENST00000484130 612 ntBASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 AC000095.1-201ENST00000603208 874 ntBASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 AL022328.1-201ENST00000610050 478 ntBASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC85AQ96PX6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 FTH1P14-201ENST00000482930 551 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 ENPP7P5-201ENST00000541031 1031 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 AC244669.2-201ENST00000612320 853 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 MTHFR-217ENST00000641820 1569 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 AC134312.5-201ENST00000568031 1313 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC85AQ96PX6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 DRD5P1-201ENST00000456605 1438 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms